Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq28 120 4e-22
>seq28
Length=4887614
Score = 120 bits (132), Expect = 4e-22
Identities = 276/404 (68%), Gaps = 14/404 (3%)
Strand=Plus/Minus
Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164
||||||||||| ||| | |||||||| || || || |||| ||| || |||||
Sbjct 3687762 ACGTAAAACTGAGCAAAC-ATGTGGCAGGGTGGGAGGACCATCTTCTTCAGATCGGCGGG 3687704
Query 147165 GTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAA 147223
||||||||| || | | ||| || | | || | ||||| | | || | ||||
Sbjct 3687703 GTTCCAGGCGGAAAGGATCAGACGAC-GATCGTATGGGTTGGTGCGCAGCTTGTGAATAA 3687645
Query 147224 CCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGG 147283
| |||||||| || ||||||||| ||||| ||| | ||| |||||| ||
Sbjct 3687644 TCTCGGCGAGCTGGTCGACTCCCTGGCCCGTGTAGTCCGTCTTGGCGTCGACGTACTCGG 3687585
Query 147284 CCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCG 147343
| |||||||||| |||||||||||||||||| || || |||||||| || | ||| |
Sbjct 3687584 CACCAAAGTGCCGCCACTGGAAGCCGTACACGGGGCCAAGGTCGCCAACCTCGCGGTG-G 3687526
Query 147344 AGAAGCCCGCCCGCTT---GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTC 147400
|| ||| | || ||| |||||| |||| || | | |||||||||| | |
Sbjct 3687525 TTGAGACCG--AGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGC 3687468
Query 147401 C--CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458
| | | || ||| ||| | ||| ||| |||| |||||||||||| ||||| |
Sbjct 3687467 CGGCCTCGCTGAG-GCT-AGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGC 3687410
Query 147459 CAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502
| ||| | | |||||| | ||||||||| || |||||||
Sbjct 3687409 GATAACGGCGCGGGTAAAGACGCGCTTGGTGGTGAGGAGGGGGA 3687366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487248759200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |