Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq28 120 4e-22 >seq28 Length=4887614 Score = 120 bits (132), Expect = 4e-22 Identities = 276/404 (68%), Gaps = 14/404 (3%) Strand=Plus/Minus Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164 ||||||||||| ||| | |||||||| || || || |||| ||| || ||||| Sbjct 3687762 ACGTAAAACTGAGCAAAC-ATGTGGCAGGGTGGGAGGACCATCTTCTTCAGATCGGCGGG 3687704 Query 147165 GTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||||| || | | ||| || | | || | ||||| | | || | |||| Sbjct 3687703 GTTCCAGGCGGAAAGGATCAGACGAC-GATCGTATGGGTTGGTGCGCAGCTTGTGAATAA 3687645 Query 147224 CCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGG 147283 | |||||||| || ||||||||| ||||| ||| | ||| |||||| || Sbjct 3687644 TCTCGGCGAGCTGGTCGACTCCCTGGCCCGTGTAGTCCGTCTTGGCGTCGACGTACTCGG 3687585 Query 147284 CCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCG 147343 | |||||||||| |||||||||||||||||| || || |||||||| || | ||| | Sbjct 3687584 CACCAAAGTGCCGCCACTGGAAGCCGTACACGGGGCCAAGGTCGCCAACCTCGCGGTG-G 3687526 Query 147344 AGAAGCCCGCCCGCTT---GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTC 147400 || ||| | || ||| |||||| |||| || | | |||||||||| | | Sbjct 3687525 TTGAGACCG--AGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGC 3687468 Query 147401 C--CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458 | | | || ||| ||| | ||| ||| |||| |||||||||||| ||||| | Sbjct 3687467 CGGCCTCGCTGAG-GCT-AGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGC 3687410 Query 147459 CAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 | ||| | | |||||| | ||||||||| || ||||||| Sbjct 3687409 GATAACGGCGCGGGTAAAGACGCGCTTGGTGGTGAGGAGGGGGA 3687366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487248759200