Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq41 116 3e-21
seq32 116 3e-21
>seq41
Length=1307349
Score = 116 bits (128), Expect = 3e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || |||||||| ||| || ||| || | || || |||||||||||
Sbjct 954357 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 954416
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
||||| || | ||||||||||| | |||| || |||||||||| |||||| |||
Sbjct 954417 GCAAAGATAAGTCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 954476
Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718
| |||| | | |||||| || |||||||| | ||||| || || ||||| | ||
Sbjct 954477 A-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTAAGGGT 954535
Query 35719 TTTCACAAATATCTGCAT 35736
|| || || ||||||||
Sbjct 954536 CTTGACGAAGATCTGCAT 954553
>seq32
Length=3227256
Score = 116 bits (128), Expect = 3e-21
Identities = 141/191 (74%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| ||||||||||| || | | ||| || |||| |||||||||||||| |||||
Sbjct 1807438 TCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAG 1807497
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | |||||||||| || || | | |||||||||| ||||| ||||| | |
Sbjct 1807498 ATAAGTCGCTGCTGGT-CGGGGGGATACCCTCCTTGTCCTGAATCTTGGACTTCACATTA 1807556
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || ||||| || || ||||||| ||||| || || || || | ||| || |||
Sbjct 1807557 TCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCTGTGAGAGTCTTGACA 1807616
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 1807617 AAGATCTGCAT 1807627
Score = 82.4 bits (90), Expect = 7e-11
Identities = 120/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||||| | ||| || | || || |||||||| || || ||
Sbjct 1808104 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAA 1808163
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| || | ||| | || |||||||||| ||||| ||| | | |
Sbjct 1808164 AATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATT 1808223
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
| | || || || || ||||| | ||||| || || |||||||
Sbjct 1808224 GTCGATGGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTCA 1808273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793019603240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |