Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq37 279 6e-70
seq54 96.9 4e-15
seq57 84.2 3e-11
seq30 84.2 3e-11
>seq37
Length=4018383
Score = 279 bits (308), Expect = 6e-70
Identities = 978/1495 (65%), Gaps = 49/1495 (3%)
Strand=Plus/Minus
Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740
||||| || |||||| | | | |||||||||| | ||||| || || ||||| ||
Sbjct 715496 AACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCG 715437
Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800
|| ||||||| ||| || | ||| ||| || ||||| || || | || ||||||||
Sbjct 715436 TTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTG 715377
Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GG 110858
|| ||| | |||||||| | ||| ||||| |||||||| || || | ||
Sbjct 715376 CGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAGA-GATCAGAGGG 715318
Query 110859 TTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGG 110918
||||| |||| ||||||| ||||| || | || | || || ||||| |||| ||||
Sbjct 715317 CTTCACGTTCC-ACATGTCGAACTGGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAAGG 715259
Query 110919 TTTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATAC 110977
| || | ||| | | | |||| | ||| | || ||| | || || ||
Sbjct 715258 TAGAGTAAGGACCCTCCTCCTTGGCCAGCTGCACGGAA-GCAGTCAGAGCAGCATGGTAG 715200
Query 110978 ATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC-AAATGCGTAGCG 111036
||||| |||||||| | |||| ||| || ||| || || ||| || | |||
Sbjct 715199 ATGGTCTCAAAGATCTGCTTGTTCAGCTCTCGAGCCTCAGGAGACTCGAAAGGCAT-GCG 715141
Query 111037 GCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095
|| | || || |||| || ||||| || ||||| | |||||||||| ||||||||
Sbjct 715140 -CAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACGCCAATAGGTCGGTGTCGCA 715082
Query 111096 TATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTA 111152
| || || | ||| || ||| ||||| || || ||||||| | ||| |
Sbjct 715081 TGTTG--CTGTTGCG-AGCTTCAGGAACGGGGTAGTGGTTCACATCAATGATCCTGTTCA 715025
Query 111153 GATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCT 111212
| || ||| ||| ||||| || || || || | | ||| | || | ||
Sbjct 715024 GGTTGCGAACGACAGTCTGTGTGACCTCGTGCAGCTTCTGGAAGTCATA---GCAGGCCT 714968
Query 111213 CTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269
| |||| ||| | |||||||||| || || | || || ||||| |||||
Sbjct 714967 CGTCATAGTTGATGAAAGAGGGAAGGGCGAGAGAGGCAAGGTTACAGACAGCAACCTCAT 714908
Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329
| | |||||| | || || || || | |||||| || ||| || |||| |
Sbjct 714907 CAGGGGCACAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGT 714848
Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389
|||| ||||| ||||| |||||| |||||||||||||||| |||| | || ||||
Sbjct 714847 TCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGTCT 714788
Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGG-- 111446
| ||||| | | ||| || || | ||| | | || | | || |||| |||
Sbjct 714787 CGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTC----ATGGTCTTGCGA 714732
Query 111447 CCCGTCCCT-CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCG 111505
||| | || || ||| ||||| ||| || || || ||||||||||| ||||
Sbjct 714731 CCCTTGCCGGCCTTCTCATACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCG 714672
Query 111506 GAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGC 111565
| |||||| || || || ||||| | |||| ||| | ||| | ||| || |||
Sbjct 714671 GCGAGACCGGGACACTCGTTGGGACACATCAGAGTCCAGTCACCGTTCTTCTCGACACGC 714612
Query 111566 TTCATGAAAAGGTCTGGAATCCACAGGG--ATGAAAAGAGATCTCTACACCGAGCCTCTT 111623
|||||||| || || |||||||| || | | ||| | || || | | || ||||||
Sbjct 714611 TTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACA-AG-TCGCGAGCGCGGACCTCTT 714554
Query 111624 CGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 111683
| | || ||||| || | ||||||||||| | || ||| |||||||| |||||||
Sbjct 714553 CCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAA 714494
Query 111684 GATAGACTGCGATAGATCCCTTTCGACGC---CCAGCTTGATTTACATAGCGCGCTGTGG 111740
| |||| || | || || ||| ||| | |||| || || || || |||
Sbjct 714493 GGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGT 714434
Query 111741 CGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC-CGAA-T 111798
||| || || |||||||| || ||| ||| | || ||| || || || ||| |
Sbjct 714433 TGTTGAAGACACGAAGCATAGGGGTAACACCGTTGGAGGTACCGTTGGTACCGGCGATGT 714374
Query 111799 ACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGA 111858
| ||| | |||| | | || | || || |||||||| |||||| ||| ||
Sbjct 714373 AGGAGCC--AGTGGCACGGATTCGGTGCACGTTCAGACCAATACCACCAGCCATCTTGGA 714316
Query 111859 GATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGC 111918
|| ||||| | | ||||| |||| ||||| | || ||||||||| || |
Sbjct 714315 AATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATACTGTCCTCCTTCATGTC 714256
Query 111919 GATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGT 111978
|| ||||||||| ||| | ||| || || ||||| |||||||||||||| || |
Sbjct 714255 GACAAGGAAGCATGAGGAGAGCTGAGGCTGGGGAGTACCCGCATTGAAGAGGGTGGGGGA 714196
Query 111979 TGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATG 112036
|| || ||| | | |||| ||||| || ||| ||||| | |||| ||||||
Sbjct 714195 GGCATGGGTGA--AGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGGACACGCTCAATG 714138
Query 112037 TCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGG 112096
| || || |||||||| || || ||||||| ||||| ||| ||| || | |
Sbjct 714137 TTGTCACCCCAGATGCCGACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATC 714078
Query 112097 ATGCCATCGAGCCGTTGA--AGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
||||||| | | |||| || ||| |||||| || |||| ||||||||
Sbjct 714077 TTGCCATCAATC--TTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTA 714025
>seq54
Length=1261221
Score = 96.9 bits (106), Expect = 4e-15
Identities = 526/820 (64%), Gaps = 31/820 (4%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| ||||| |||||||| |||||||||||||| ||| | ||| ||||| |||||
Sbjct 1145168 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATG 1145227
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485
||||| || || || | || | | | | || |||| | |||||
Sbjct 1145228 AAGTCGAAGGGGTTGGCAGACTTGTAGACCTTCTCGTTG----CCCAGGGCGAC-GAGGA 1145282
Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545
|||| || | || |||| ||||||| ||| | | |||||| |||| ||||
Sbjct 1145283 GACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGGAGGG 1145342
Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605
|| ||||| || || | |||| | | |||||| || || || | | ||||
Sbjct 1145343 CGCAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGT 1145402
Query 122606 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 122662
| ||||| | | | ||| | | || | | | || ||| || |||||
Sbjct 1145403 CCTGGATGATCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CA-GGCAA 1145459
Query 122663 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCA 122722
| || ||| ||||||||||| || || || || || || |||||| ||||| ||||
Sbjct 1145460 AGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCA 1145519
Query 122723 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 122781
||||||| |||||||| | ||| | || | ||| || | || |||||||||||||
Sbjct 1145520 TGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCACTGAAGAAGATACCC 1145578
Query 122782 TCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCA 122840
|| || || || |||| || || | || ||||| ||| | ||| | | | |||
Sbjct 1145579 TCGACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGA-AGAGTCCTTGTCCTGGATCCA 1145637
Query 122841 TTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC-TTCAAATA 122899
| | || ||||| | |||||||| || || || | || | ||||| || ||
Sbjct 1145638 TCTGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAG 1145697
Query 122900 ACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGC 122959
| | ||| | ||| ||||| ||||| ||||||| | || || || |||
Sbjct 1145698 ATAGGTTC-GCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGG 1145756
Query 122960 CATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGA 123018
|| | | | ||| ||| | || | ||||||| | || || ||| ||||||
Sbjct 1145757 AGTGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCATCGAGCCTCGGGGATCTGA 1145815
Query 123019 ACCTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 123077
||||| |||| ||| | | | | |||||| || || || || || | || ||
Sbjct 1145816 ACCTC-GCCGCTGAATCGCTCAACAAGATTCTCGTTGACGATGCCGTCAGAGGCGGCGAA 1145874
Query 123078 GAATGCCAGGATGT---ACTTTATGAATTTCTTTTCA-TTTTCATTCAGGGTCTTCCAGT 123133
||| || ||||||| | | | ||| | || ||| ||| | || | |||||||
Sbjct 1145875 GAAGGCAAGGATGTGAGAGATGAAGAACTGCTCGTCAGAGGTCAGGC-GGTTGTTCCAGT 1145933
Query 123134 CGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
||| ||||| ||||||| ||||| || || ||||||||
Sbjct 1145934 CGTGGAGATCCTTGGACAGATCAATCTCCTCGGCAGTCCA 1145973
>seq57
Length=2357170
Score = 84.2 bits (92), Expect = 3e-11
Identities = 187/274 (68%), Gaps = 10/274 (4%)
Strand=Plus/Minus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689
|| || |||||||||||||||| || || || || | |||| | | || |||
Sbjct 875207 GCGTCGATCTCATCAATGAAGATGATGCAAGGAGCGTTCTTGCGGCCTTCGGCGAACAGA 875148
Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAGC 11747
|| || || | | ||| ||||| ||||||||||| || || | | | || | |
Sbjct 875147 TCTCGCACACGAGAAGGACCAACACCCACAAACATCTCGACGAATTCAGAACCGCTCA-C 875089
Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807
|||| | ||| ||||| || || || || |||| |||||| || ||||| ||||
Sbjct 875088 ACTGAA-GAAGGGGACTCCAGACTCGCCAGCCGTGGCCTTGGCGAGCAGTGTCTTACCCG 875030
Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTC-CAAAAT 11864
|||| || || || |||| || |||||||||||||||||||| |||| | || |
Sbjct 875029 TACCAGGGGGGCCAGCCAGAATTGCTCCTCGGGGGATCTTGGCACCGAGCTTCTCGAACT 874970
Query 11865 ATCTCTCGGGTTGCTTGAGAAAATCCACAATCTC 11898
||||||| ||||| | || ||||| |||
Sbjct 874969 ---TCTCGGGCTGCTTCAAGAAGCTCACAAACTC 874939
>seq30
Length=3684817
Score = 84.2 bits (92), Expect = 3e-11
Identities = 162/238 (68%), Gaps = 6/238 (3%)
Strand=Plus/Plus
Query 181811 ACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTGTTTGA 181870
|||||| ||| || | ||| || | |||| |||||| || ||| |||||||||||
Sbjct 2173990 ACCACCGGCGAGTCGAGAACCGAAGTTTCCACTTGGCTCTAGGCAGTTGATGTTGTTTGA 2174049
Query 181871 ACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCAAGGGACACTTCACCGTGGTG 181930
|| | ||| | ||||| || |||||| | || ||| | |||||||||||
Sbjct 2174050 TCCCACAAAGTTCTGGGCCAGGCCAATGATGGTCTGTTGGAGAGACGCCTCACCGTGGTG 2174109
Query 181931 GTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATCTTTG-- 181988
||| |||| || || | ||||| | ||||| | | |||||| | ||| |||
Sbjct 2174110 GTATGCTGTCTGTTCAGACACATAACCAGCCAATTCCACGACCTTC---TTATCCTTGAC 2174166
Query 181989 -AGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATCC 182045
||||| | | ||||||||| || | ||| || | ||| ||||||| |||||||
Sbjct 2174167 CAGGTTTCTCTTGAAGCAAGCGTAGAGCACCTTGCGCTGACCGGGCTTGAAACCATCC 2174224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031191408800
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