Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq37 226 4e-54
seq54 197 2e-45
>seq37
Length=4018383
Score = 226 bits (250), Expect = 4e-54
Identities = 1083/1696 (64%), Gaps = 69/1696 (4%)
Strand=Plus/Minus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
||||||||||||| || |||| | ||| ||||||||||| |||||||| || |
Sbjct 715846 TGAACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGAC 715787
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
| |||||||| | | ||||| || | |||| | ||| || | ||||
Sbjct 715786 CGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGT 715727
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
|| ||| | | ||||| ||||| |||||| || || || || ||||| | | |
Sbjct 715726 GGATGTTGAGAGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCTGCCATCTGGACGA 715667
Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041
| || || | || |||||||| ||| ||||||| ||| | ||| | ||||
Sbjct 715666 C---CTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTGACCTCAGCGGGGA 715610
Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGA---GATCCTTCAT---AT 118095
| | ||| || |||||||| ||| || | |||| | | |||||| ||
Sbjct 715609 TGTTGGGGATGTTCTGGATGGA---ACCGTTCTCAGCAATGATTCGGTTCTTCATGGAAT 715553
Query 118096 CCTTTGACCAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACA 118151
|| ||||| || || || | |||||||| | || || | || || ||
Sbjct 715552 CC---GACCACAGGCCCATATCGACGAGATCCTTGAGCAACCAGGGG----TTAACGACC 715500
Query 118152 ACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCAC 118211
||||| || |||||| || | | | ||||| |||| ||||| ||||| ||||||
Sbjct 715499 TGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCAC 715440
Query 118212 TCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTG 118271
|| |||||||||| ||| || | ||| ||| ||||||||||| || | || || |||
Sbjct 715439 TCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAGACTG 715380
Query 118272 TTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGC-TT 118330
|| ||| ||| | ||| | | | ||| |||||| |||||||| || || |
Sbjct 715379 TTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAG-AGATCAGA 715321
Query 118331 TGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 118390
| || | | | |||||| || |||||||| ||||| | || || || || |||| ||
Sbjct 715320 GGGCTTCACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAA 715261
Query 118391 TGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTG 118447
|| || || ||||| ||| |||| | |||| || || || || ||
Sbjct 715260 GGTAGAGTAAGGACCCTCCTCCTTGGCCAGCTGCACGGA---AGCAGTCAGAGCAGCATG 715204
Query 118448 ATACATTGTTTCAAAAATGCGAGCATTCATTGC-CTTG-GCCTCGTCGGAATCAAACGCG 118505
|| || || ||||| || | |||| || || | ||||| || || || | |
Sbjct 715203 GTAGATGGTCTCAAAGATCTGCTTGTTCA--GCTCTCGAGCCTCAGGAGACTCGAAAG-G 715147
Query 118506 AGTCGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATG 118564
| ||| | || || |||| || ||||| |||||||||| |||||| || || ||
Sbjct 715146 CATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACGCCAATAGGTCGGTG 715087
Query 118565 TCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATT 118624
|| ||| || || ||||| ||||| || ||| ||| || | ||| ||
Sbjct 715086 TCGCATGTTGCTGTTGCGAGCTTCAGGAACGGGGTAGTGGTTCACATCAATGATCCTGTT 715027
Query 118625 TAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT 118684
|| || |||| || ||||| || || ||||| | | | ||| | || |
Sbjct 715026 CAGGTTGCGAACGACAGTCTGTGTGACCTCGTGCAGCTTCTGGAAGTCATA---GCAGGC 714970
Query 118685 CTCTTCA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 118741
||| ||| |||| | |||||||||| || || || ||||| |||| |||
Sbjct 714969 CTCGTCATAGTTGATGAAAGAGGGAAGGGCGAGAGAGGCAAGGTTACAGACAGCAACCTC 714910
Query 118742 ATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAA 118801
||| || |||||| || || || ||||||| ||| || || |||||| ||||
Sbjct 714909 ATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAG 714850
Query 118802 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 118861
|||||| || || ||| ||| || ||||||||| |||||| | || | || ||
Sbjct 714849 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGT 714790
Query 118862 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTG- 118919
||| || || | || ||| || || | ||||| | || | || || ||| |||
Sbjct 714789 CTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTCTG-GGCCTTCA---TGGTCTTGC 714734
Query 118920 ---GCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCC 118976
|| ||| ||| ||| ||||| ||| || || || ||||| ||||| |
Sbjct 714733 GACCCTTGCCGGCCTT-CTCATACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAG 714675
Query 118977 TCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACC 119036
|| | ||| || || || | || || | |||| ||| | ||| || ||| ||
Sbjct 714674 TCGGCGAGACCGGGACACTCGTTGGGACACATCAGAGTCCAGTCACCGTTCTTCTCGACA 714615
Query 119037 CGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCT 119096
|||||||||||||| || || |||||||| ||| ||| | || ||| ||| | |||
Sbjct 714614 CGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAAGTCGCGAGCGCGGACCTCT 714555
Query 119097 TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCC 119156
|| | || || || |||| || | || || | || ||| |||||||| || ||
Sbjct 714554 TCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCA 714495
Query 119157 AGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCA 119210
||||| | || | | || | | || ||| |||| | || || | |||
Sbjct 714494 AGGTAGATGGCAAAAGCACC---AGGTCGCTTGTTGCCACCCTGATCGACGTATCGGGCA 714438
Query 119211 GTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCG 119269
||| ||| || ||||||||||| || | | ||| | ||| || || || || ||
Sbjct 714437 GTGTTGTTGAAGACACGAAGCATAGGGGTAACACCGTTGGAGGTACCGTTGGTACCGGCG 714378
Query 119270 A-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACT 119328
| || ||| | | |||| | || ||| | || || ||||||||| || ||| ||
Sbjct 714377 ATGTAGGAGCC--AGTGGCACGGATTCGGTGCACGTTCAGACCAATACCACCAGCCATCT 714320
Query 119329 TTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTAT 119388
| || || || || | ||||| | | || || || || || ||| ||||
Sbjct 714319 TGGAAATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATACTGTCCTCCTTCA 714260
Query 119389 TTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTG 119448
| ||| |||||||| || | |||||| ||| ||||| || |||||||| || |
Sbjct 714259 TGTCGACAAGGAAGCATGAGGAGAGCTGAGGCTGGGGAGTACCCGCATTGAAGAGGGTGG 714200
Query 119449 GTGTCGCGTGGATGAA 119464
| | || ||| ||||
Sbjct 714199 GGGAGGCATGGGTGAA 714184
>seq54
Length=1261221
Score = 197 bits (218), Expect = 2e-45
Identities = 540/813 (66%), Gaps = 17/813 (2%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| ||||| || ||| | ||| ||||||||
Sbjct 1145168 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATG 1145227
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| || || | | | || | ||| | |||||||||
Sbjct 1145228 AAGTCGAAGGGGTTGGCAGACTTGTAGACCTTCTCGTTGCCCAGGGCGAC-GAGGAGACG 1145286
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | |||| |||| ||||||| ||| | || |||||| |||| |||| ||
Sbjct 1145287 GTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGGAGGGCGCA 1145346
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
||||| || || | |||| ||| ||||||| || || || | |||| | ||
Sbjct 1145347 GGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGTCCTG 1145406
Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023
||| ||| | ||| || | | ||| | | | || ||| || |||||| ||
Sbjct 1145407 GATGATCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CA-GGCAAAGTC 1145463
Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083
||| |||||||| ||||| |||||||| || || |||||| |||||| ||||||||
Sbjct 1145464 GGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAG 1145523
Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||| |||||||| | |||||| || | | ||| | ||| ||||||||| ||||| ||
Sbjct 1145524 ACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAGATACCCTCGAC 1145583
Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCA 130202
||||| |||| |||||||| ||||||||| | | | |||| | | ||| | |
Sbjct 1145584 GGCAGCGAAGGCAACGAGACGCTGAGCAAAGGA-AGAGTCCTTGTCCTGGATCCATCTGA 1145642
Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262
| ||||| | ||||| || ||| || |||| ||||| || || | ||||| |
Sbjct 1145643 TAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAGATAGG 1145702
Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322
| | || || || |||||||| | || ||||| || || || ||| ||||
Sbjct 1145703 TTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGA 1145762
Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381
| | ||| || | ||| | ||||||| | || || ||| ||||| |||||
Sbjct 1145763 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGAACCTC- 1145820
Query 130382 TCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 130440
| || ||| | | | | |||||| || || || || || | || || || ||
Sbjct 1145821 GCCGCTGAATCGCTCAACAAGATTCTCGTTGACGATGCCGTCAGAGGCGGCGAAGAAGGC 1145880
Query 130441 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAG 130497
||||| | ||||| ||| || | | ||| || | |||||||||| ||
Sbjct 1145881 AAGGATGTGAGAGATGAAGAACTGCTCGTCAGAGGTCAGGCGGTTGTTCCAGTCGTGGAG 1145940
Query 130498 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|||||| || ||||| | |||||| ||||||||
Sbjct 1145941 ATCCTTGGACAGATCAATCTCCTCGGCAGTCCA 1145973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434403764680
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