Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq37 307 1e-78 seq54 145 9e-30 seq57 89.7 6e-13 >seq37 Length=4018383 Score = 307 bits (340), Expect = 1e-78 Identities = 939/1429 (66%), Gaps = 47/1429 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| || || |||| || || || ||||||| ||| Sbjct 714090 CCCCCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGTGACAACATTGAGCGTGT 714149 Query 104281 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 104338 | | ||||| ||| || ||||| |||| | | ||| || || | || |||||| Sbjct 714150 CCTCGAGACTTACAACCTCATGTCGAGCAAGTTCT--TCACCCATGCCTCCCCCACCCTC 714207 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 |||||||| ||||| || || || | ||| ||||||||| ||| || |||||| Sbjct 714208 TTCAATGCGGGTACTCCCCAGCCTCAGCTCTCCTCATGCTTCCTTGTCGACATGAAGGAG 714267 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| || | ||||| |||| ||||| | | ||||| || || ||| |||| Sbjct 714268 GACAGTATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGATGGCT 714327 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 104516 || |||||||| || || | || | | |||| | ||| || ||| || | Sbjct 714328 GGTGGTATTGGTCTGAACGTGCACCGAATCCGTGCCACTGG--CTCCTACATCGCCGGTA 714385 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || ||| || | ||| ||| || |||||||| || || ||| ||| || || | Sbjct 714386 CCAACGGTACCTCCAACGGTGTTACCCCTATGCTTCGTGTCTTCAACAACACTGCCCGAT 714445 Query 104577 ATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | || |||| | ||| ||| || || | || |||| |||||||| |||| Sbjct 714446 ACGTCGATCAGGGTGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTTGAGCCCTGGC 714505 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGCG 104691 |||| ||| || | ||||||||||| |||| ||||| || | || |||| |||| Sbjct 714506 ACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCG 714565 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 | ||||| | ||| |||||||||||||| ||||||||||||||| | || ||| | Sbjct 714566 CT--CGCGACTTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAA 714623 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 || || | ||| |||| | ||||| || || || |||||| |||| | || Sbjct 714624 GAACGGTGACTGGACTCTGATGTGTCCCAACGAGTGTCCCGGTCTCGCCGACTGCTACGG 714683 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG------AAGGTCGGGCGACTGC 104865 ||||||||| || || || ||| ||||| ||| | | | ||||| ||| Sbjct 714684 TGAGGAGTTCGAGGCTCTGTACGAGAAGTATGAGAAGGCCGGCAAGGGTCGCAAGACCAT 714743 Query 104866 GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 || || |||| || | ||| | || || ||| || |||| ||||||||||||| Sbjct 714744 GAAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAA 714797 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || | |||||| ||||| || ||| |||| ||||| || || ||||| ||||| Sbjct 714798 CCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTAC 714857 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 || || ||||| || || || || ||| | || | | | |||||| || Sbjct 714858 CATTCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTTGC 714917 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATC--CAGAGACAAAGAC- 105102 ||| |||||||| || || |||| || ||| | | | ||| | ||| | | | Sbjct 714918 TGTCTGTAACCTTGCCTCTCTCGCCCTTCCC---TCT-TTCATCAACTATGACGAGGCCT 714973 Query 105103 -ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161 | ||| | | || || ||||| || || | |||||| ||||| ||||| Sbjct 714974 GCTATGACTTCCAGAAGCTGCACGAGGTCACACAGACTGTCGTTCGCAACCTGAACAGGA 715033 Query 105162 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 | |||||| || ||||||||| ||||| || || ||| ||||||| | Sbjct 715034 TCATTGATGTGAACCACTACCCCGTTCCTGAAGCTCGCAACAGCAACATGCGACACCGAC 715093 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT 105280 | ||||| ||||||| |||||||| || |||| ||| || || || || || || ||| Sbjct 715094 CTATTGGCGTCGGTGTCCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CG-CATGCCTTT 715151 Query 105281 -GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGC 105339 || || || || || | || || || ||||||||||| || || || || Sbjct 715152 CGAGTCTCCTGAGGCTCGAGAGCTGAACAAGCAGATCTTTGAGACCATCTACCATGCTGC 715211 Query 105340 TCTTGAGGCGAGTTCAG---AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396 ||| | | ||| | || |||| ||| || ||||| || ||||| |||| Sbjct 715212 TCT---GACTGCTTCCGTGCAGCTGGCCAAGGAGGAGGGTCCTTACTCTACCTTCAAGGG 715268 Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTG-AGACCAAGCTTC 105455 ||||| || || | || | || || || || |||| |||| ||| || || || Sbjct 715269 CTCTCCTGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAACGTGAAGCCCTCTGATC 715327 Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 || |||||||| |||||| ||| | |||||||| | ||| || |||||||| | Sbjct 715328 TCTGGGACTGGGAGTCTCTCAGGGAGCAGGTCAAGGAGCATGGTACCCGCAACAGTCTGC 715387 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 | | || || ||||| || ||| ||| | || ||| ||||||| || || ||||| | Sbjct 715388 TGCTTGCCCCCATGCCCACTGCCAGCACTTCGCAGATCCTGGGTAACAACGAGTGCTTCG 715447 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTT 105624 | || ||||| | |||||||| | | | | |||||| || ||||| Sbjct 715448 AGCCTTACACCTCCAACATCTACCAGCGTCGTGTCCTCGCTGGCGAGTT 715496 >seq54 Length=1261221 Score = 145 bits (160), Expect = 9e-30 Identities = 209/287 (73%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 94730 ||||| |||| || || ||||| | || || ||| | | ||||| | ||||| | Sbjct 1145739 CTCATTGACACCTACATCAAGGAGCCTTCTCAGC-GAACCTATCTCTTCAACGCCATTGA 1145681 Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 94789 || | || || || | ||||| || || |||||||| | ||| | | |||| | Sbjct 1145680 GACCATCCCTTGCATCCGCAAGAAGGCCGACTGGGCTATCAGATGGATCCAGGACAAGGA 1145621 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | | |||||||||| |||| ||| | || || || || ||||||||||||||| || Sbjct 1145620 CTC-TTCCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGTG 1145562 Query 94850 GTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 94908 || |||| ||| | || | |||||||||||||| ||||||||||| ||||| |||| Sbjct 1145561 GTGCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTC 1145503 Query 94909 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||||| ||||||||||| ||||| || ||| || ||||| Sbjct 1145502 TCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACCGACTTTGC 1145456 >seq57 Length=2357170 Score = 89.7 bits (98), Expect = 6e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 ||| || |||||||||||||||| |||||| || || | ||| | | | || || Sbjct 875208 GGCGTCGATCTCATCAATGAAGATGATGCAAGGAGCGTTCTTGCGGCCTTCGGCGAACAG 875149 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821 ||| || ||||| | || ||||| ||||||||||| || || | | || || Sbjct 875148 ATCTCGCACACGAGAAGGACCAACACCCACAAACATCTCGACGAATTCAGAACCGCTCAC 875089 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 | || | ||||||||| ||| || || || |||| |||||| || |||||||||| Sbjct 875088 ACTGAA-GAAGGGGACTCCAGACTCGCCAGCCGTGGCCTTGGCGAGCAGTGTCTTACCCG 875030 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||| || || || || | || ||||| || |||||||| || Sbjct 875029 TACCAGGGGGGCCAGCCAGAATTGCTCCTCGGGGGATCTTGGCACC 874984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260049051720