Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq37 253 2e-62
seq30 150 2e-31
>seq37
Length=4018383
Score = 253 bits (280), Expect = 2e-62
Identities = 517/758 (68%), Gaps = 24/758 (3%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || || | || ||| |||||| || |||||||| ||||| |||
Sbjct 714104 TCATGCGTGTTGCTGTCGGCATCTGGGGTGACAACATTGAGCGTGTCCTCGAGACTTACA 714163
Query 53253 ACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309
|| | ||| ||| |||| ||| || || ||| | || ||||| ||||| || ||||
Sbjct 714164 ACCTCATGTCGAGC---AAGTTCTTCACCCATGCCTCCCCCACCCTCTTCAATGCGGGTA 714220
Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369
| || |||||| | || |||||||| || | |||||||| ||| || || |
Sbjct 714221 CTCCCCAGCCTCAGCTCTCCTCATGCTTCCTTGTCGACATGAAGGAGGACAGTATTGAGG 714280
Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429
| || || || || |||||| |||||| || |||||| | | |||||||| |||
Sbjct 714281 GTATTTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGTC 714340
Query 53430 TCCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487
| || ||| | ||| ||||||| | ||| | ||| || || ||||| | |
Sbjct 714341 TGAACGTGCACCGAA--TCCGTGCCACTGGCTCCTACATCGCCGGTACCAACGGTACCTC 714398
Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547
| | || | |||||||| || |||||||||||||| ||||| |||||| | |||||
Sbjct 714399 CAACGGTGTTACCCCTATGCTTCGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGG 714458
Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607
||| ||||| || | || ||||||||||| ||||| |||||||| || | |
Sbjct 714459 TGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTT 714518
Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT 53667
||||| || || ||||| ||| || || | |||||| | ||| || ||| ||||
Sbjct 714519 TGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCTCGCGACTTGTT 714578
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727
||||| |||||||| || ||||||||| | || |||||| ||| || |||
Sbjct 714579 CCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGTGACTGGAC 714638
Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACG 53786
|||||||| || |||||||| ||||| ||| | | || ||||||||||||||| | |
Sbjct 714639 TCTGATGTGTCCCAACGAGTGTCCCGGTCTCGCCGACTG-CTACGGTGAGGAGTTCGAGG 714697
Query 53787 AGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG------AAGAAGGTCAAGGCGC 53840
|||| || ||| | || | ||||| |||| |||| | ||||| |
Sbjct 714698 CTCTGTACGAGAAGTATG-AG---AAGGCCG--GCAAGGGTCGCAAGACCATGAAGGCCC 714751
Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCT 53900
|| | ||| |||| |||||| || ||| ||||| || | || | |||| ||
Sbjct 714752 AGAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCT 714811
Query 53901 ACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
|||||||| |||| ||||||||||||||||||
Sbjct 714812 ACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAAC 714849
Score = 89.7 bits (98), Expect = 6e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
|| || || ||||| | ||| || |||||||||||||| |||||| |||| || | ||
Sbjct 715681 GCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCTCTCAACATCCACATGAAGGACCCC 715740
Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
| ||| |||| | | | ||||||||| ||| |||||| || || ||||||||
Sbjct 715741 ACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGGTCTGAAGACGGGC 715800
Query 55907 ATGTACTATCTGCGGAC 55923
|||||||| ||||| ||
Sbjct 715801 ATGTACTACCTGCGAAC 715817
>seq30
Length=3684817
Score = 150 bits (166), Expect = 2e-31
Identities = 214/299 (72%), Gaps = 4/299 (1%)
Strand=Plus/Plus
Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358
|| ||||| || | ||||| | || ||||||||| ||||| || || || | ||||
Sbjct 2173952 AGTCGAGTAAAGGTATAACGGGGACTAGCAGCATCCGAACCACCGGCGAGTCGAGAACCG 2174011
Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418
|| | |||||| ||||| | | ||| | |||||| | ||||||||||| || |||| |
Sbjct 2174012 AAGTTTCCACTTGGCTCTAGGCAGTTGATGTTGTTTGATCCCACAAAGTTCTGGGCCAGG 2174071
Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478
| || || |||||| ||||||||| ||||| || || ||||| || | |||
Sbjct 2174072 CCAATGATGGTCTGTTGGAGAGACGCCTCACCGTGGTGGTATGCTGTCTGTTCAGACACA 2174131
Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536
|| || |||| | | |||||| | || |||| |||||| |||||| ||| || |
Sbjct 2174132 TAACCAGCCAATTCCACGACCTTCTTATCCTTGAC--CAGGTTTCTCTTGAAGCAAGCGT 2174189
Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTG 117595
| | |||||||||||||| ||||| | ||||||| || ||||||||| ||| ||
Sbjct 2174190 AGAGCACCTTGCGCTGACCGGGCTTGAAACCATCCAGGACCGAAGGGATCGATCGCATG 2174248
Score = 111 bits (122), Expect = 2e-19
Identities = 201/294 (68%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085
|| || ||| | || |||| || || |||||| ||||| || || || | || ||
Sbjct 2173955 CGAGTAAAGGTATAACGGGGACTAGCAGCATCCGAACCACCGGCGAGTCGAGAACCGAAG 2174014
Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145
| |||| ||||| ||| ||||| |||||| | ||||| || ||||| ||||
Sbjct 2174015 TTTCCACTTGGCTCTAGGCAGTTGATGTTGTTTGATCCCACAAAGTTCTGGGCCAGGCCA 2174074
Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205
| || || || ||| ||| ||||||||||| || || ||||| || | | ||
Sbjct 2174075 ATGATGGTCTGTTGGAGAGACGCCTCACCGTGGTGGTATGCTGTCTGTTCAGACACATAA 2174134
Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265
|| ||||| | | | |||||| | ||| | |||||| |||||| || ||||| | |
Sbjct 2174135 CCAGCCAATTCCACGACCTTCTTATCCTTGACCAGGTTTCTCTTGAAGCAAGCGTAGAGC 2174194
Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTG 152319
||||||||||| || || ||||| |||| || ||| ||||| ||| ||
Sbjct 2174195 ACCTTGCGCTGACCGGGCTTGAAACCATCCAGGACCGAAGGGATCGATCGCATG 2174248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215295459400
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