Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq32 100 2e-16
>seq32
Length=3227256
Score = 100 bits (110), Expect = 2e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
|||| |||||| | || || || || || || | || || | || || | |||||
Sbjct 1808273 TGACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCTGATACCATCGACAATGTCAAGT 1808214
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| ||||| ||||| || ||||| || || ||||| ||||| | || | ||||||||
Sbjct 1808213 CGAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATTTTCGCCGGCA 1808154
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
| || | || || | ||| |||||||||||||||| || |||||||| ||| | |
Sbjct 1808153 AGCAGCTTGAGGATGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTCC 1808094
Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| | || | ||| | || ||||||||
Sbjct 1808093 ATCTCGTCCTCCGTCTCCGTGGTGGCAT 1808066
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/198 (70%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||| || || ||| | || ||||| || || || | |
Sbjct 1807627 ATGCAGATCTTTGTCAAGACTCTCACAGGAAAGACCATCACTCTGGAGGTCGAGTCCAGC 1807568
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || || ||||| ||||| || || || || ||||| ||
Sbjct 1807567 GATACCATTGATAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATCCC-CCCGACCAG 1807509
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | || || || || |||| ||| || ||| | || || ||||||
Sbjct 1807508 CAGCGACTTATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGCACCCTCTCTGACTACAAC 1807449
Query 27168 ATTCAAAAGGAGTCGACC 27185
||||| ||||| ||||||
Sbjct 1807448 ATTCAGAAGGAATCGACC 1807431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917840042560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |