Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq35 152 1e-31 seq28 89.7 1e-12 >seq35 Length=674057 Score = 152 bits (168), Expect = 1e-31 Identities = 312/458 (68%), Gaps = 8/458 (2%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 || |||||| ||||||| || |||| | ||| || |||||| | || ||| Sbjct 114997 TCCTTTGCCCAGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATTTTCTTCAGCGGCGCC 115056 Query 230230 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 230289 ||| ||||||| ||||| ||| ||| | |||||||| || | | |||||| Sbjct 115057 TTCGCTTCCATCTTCTGGCTCAAGAAGCGCGGTCTTATGCCTGGTCTGACTTTCTCTAAC 115116 Query 230290 GAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAA 230348 ||| ||||| ||| |||||||||||||| || | | || || | | | || | Sbjct 115117 GAGCTCATCTCTCGTGACGAGGGTCTCCA-CACCGACTTTGCTTGCCTCCTCCACTCCCA 115175 Query 230349 GCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAA---ATCATTACAGAAGCAGTTGA 230405 ||| || | | ||| | || ||||| || |||||||| || || || | Sbjct 115176 CCTCAAGGGCCG--TGCCAG-CAAGCAGGTCATTCAGGACATCATTACTGATGCCGTGAA 115232 Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465 | ||| |||||||| || || ||| | || ||| ||| | |||||||| || || Sbjct 115233 CATCGAGCAGGAGTTCCTTACCGAGGCTCTGCCTTGTGCCCTGCTCGGCATGAATGCCGA 115292 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 || ||| |||||||| || ||||| || ||||| | | || || |||||| |||| Sbjct 115293 CCTCATGAAGCAGTACATTGAGTTCGTTGCTGACCGACTACTCGTCGCTCTTGGTAACGA 115352 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 ||| || || || ||| |||||||| | || |||||| ||| || || || || Sbjct 115353 GAAGGTCTATAAGTCTTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAA 115412 Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 ||||||||||||||| ||||||||| ||||||| |||| Sbjct 115413 GACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGA 115450 >seq28 Length=801081 Score = 89.7 bits (98), Expect = 1e-12 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916 |||||| || |||| ||| |||| || |||||||| ||||| || || || | || Sbjct 419481 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTTCCGGAACC 419422 Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976 ||| || ||||| ||||||||||| | || || || || || | || | ||| || Sbjct 419421 GTTGGGACCACAGAGACCGTAGCGCTGACCACGCTTGAGACGGAGGTGAGTCTGGTTGAG 419362 Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 |||||| || ||||||| || || || || ||| | || ||||||||||| Sbjct 419361 AAGAATCTTGGCACCATAGGCGAGGGAGAAGGTACAGTTGCAAAGATCCTCACC 419308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822549789410