Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq30 161 1e-34 >seq30 Length=762562 Score = 161 bits (178), Expect = 1e-34 Identities = 456/698 (65%), Gaps = 12/698 (2%) Strand=Plus/Plus Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 || || || |||| || ||||| | | ||| || |||| | || || || ||||| Sbjct 622372 CCGGGGCACTCATTAGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATG 622431 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 |||||||| || ||||| ||||| | || || || | | | | ||||| || || Sbjct 622432 AAGAGATCGGGGATCCAGAGAGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTGCCG 622491 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 ||||| || || |||||| | | | ||| || ||||| || || | ||| || Sbjct 622492 TGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATA 622551 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | ||||| || ||||| || ||||| || | |||| || ||||| || | Sbjct 622552 GCGAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCGGGCAGTGTTGTTGAAG 622611 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 |||| | ||| || | | || ||||| | ||| ||||| |||| ||| ||| || Sbjct 622612 ACTCGGAGCATGGGGGTGACGCCGTTGGAAGTACCGTTGGTACCGGCGATGTAGGAGCCG 622671 Query 54281 CTGGCACGAATAT--TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATG 54338 ||||||| || | | || | |||| || || || ||||| || || || | | Sbjct 622672 GTGGCACGGATGCGGTGCACGTTCA--GACCAATGCCACCAGCCATCTTGGAAATCATGG 622729 Query 54339 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 54398 | || || | ||||||||||| ||||| || || || ||| |||||| || || | Sbjct 622730 CACAGGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAGGA 622789 Query 54399 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 54458 | || ||||| ||| | || ||| || ||||| |||| || || || ||||| | Sbjct 622790 AGCATGAAGACAGCTGGGGCTGAGGAGTGCCAGCATTGAATAGAGTGGGGGAGGCGTGGG 622849 Query 54459 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC----CCAT 54514 | || | || || | || ||||| ||||| | | || ||||| || Sbjct 622850 TGAAGAACTTGCTCGACATGAGGTTGTATGTCTCAAGGACACGCTCAATATCGTCACCCC 622909 Query 54515 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 54574 |||| || || | |||||||| | |||||||||||| | || || |||||||| Sbjct 622910 AGATG----CCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTGTTA 622965 Query 54575 TTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 54634 | || || || | ||| ||| |||| ||| || || ||||| || | |||| ||| Sbjct 622966 TCAATCTTGAGGAGGTATGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGGTATTGGAAG 623025 Query 54635 TCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTT 54672 || || || || | ||| | |||| || | ||||| Sbjct 623026 TCACGGTCATAGACAATGGCAGAGTCCAGCTCCTCCTT 623063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720805897360