Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq26 120 4e-22 >seq26 Length=867789 Score = 120 bits (132), Expect = 4e-22 Identities = 192/272 (71%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054 || |||||| || ||||| || ||| |||||||||| || |||||| |||| || || Sbjct 13859 GACCTGGTCGACTCCCTGGCCTGTGTAGTCTGTCTTGGCATCGACGTACTCGGCGCCAAA 13918 Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCC 146114 ||| | ||| ||||| || || || || || || || || ||| | |||| || || Sbjct 13919 GTGTCGCCATTGGAAGCCATATACAGGACCGAGATCGCCAACCTCGCGGTGCGTGAGGCC 13978 Query 146115 GGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCG 146172 | | ||||||| || ||||| || ||| ||||||||||||||| ||| | |||| Sbjct 13979 GAGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCTTCGCT 14038 Query 146173 GAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCC 146232 |||| || ||||| ||| ||| ||||||||||| ||||| | | ||| | Sbjct 14039 GAGA-CT-GGTGGAGGATGTGTTGCCCTCAATGAACCAGAGGAGCTCGGCAATGACGGCA 14096 Query 146233 CTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 | |||||| | |||||||| || ||||| Sbjct 14097 CGGGTGAAGACGCGTTTGGTGGTGAGGAGGGG 14128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076010772280