Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq30 181 2e-40 seq35 134 2e-26 >seq30 Length=762562 Score = 181 bits (200), Expect = 2e-40 Identities = 632/978 (65%), Gaps = 20/978 (2%) Strand=Plus/Plus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 |||| |||||||| || || || || ||||||| || | || | || || ||| Sbjct 622096 GCGAGGGATGCCAGGTTGCACACAGCAACCTCATCAGGGGCACAGTACTCAATAATCTCA 622155 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 ||||| | ||| | |||||| || | || | || |||||||| ||| || Sbjct 622156 GTGCACAAGTTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAG 622215 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 ||||| || || ||||| || | ||||| || |||||| || | ||| || | | Sbjct 622216 TGGTCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCAAGAATAGCATAC 622275 Query 79795 CAGACGACTC-GAGCCTTTATTATAGACTTGTATCTCTTTTCT--CTT-TCGTATTGTGT 79850 |||| | || ||||||| || | |||| | ||| | || ||||| | Sbjct 622276 CAGA-GCTTCTGAGCCTTGATGGT---CTTGCGACCCTTGCCAGCCTGCTCGTACTTCTC 622331 Query 79851 ATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACA 79910 ||| | || ||||| || || | ||| | | || || || || | ||| || Sbjct 622332 ATACAGAGCCTCAAACTCATCGCCGTAGCAGTCGGCAAGACCGGGGCACTCATTAGGGCA 622391 Query 79911 CATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 79970 ||| | | ||| || || | | || || || ||||| |||||||| || ||||| || Sbjct 622392 CATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGGATCCAGAG 622451 Query 79971 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 80030 ||| | || || || | | | | |||||| || || ||||| || || || Sbjct 622452 AGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAG 622511 Query 80031 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTT 80090 |||| | | | ||| || ||||| || || | ||| || || | | || ||||| || Sbjct 622512 GAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATAGCGAAGGCACCAGGTCGCTT 622571 Query 80091 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 80150 ||| || ||||| || | |||| || ||||| || | |||| | ||| || | | Sbjct 622572 GTTGCCACCCTGGTCAACATATCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGGGTGAC 622631 Query 80151 ACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TACTA 80208 || ||||| ||||| ||||| |||| ||| ||| || ||||||| || | | Sbjct 622632 GCCGTTGGAAGTACCGTTGGTACCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGCAC 622691 Query 80209 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 80268 || | |||| || || || ||||| || || || | || || || | |||||| Sbjct 622692 GTTCA--GACCAATGCCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAGTATCA 622749 Query 80269 TAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 80328 ||||| ||||| ||||| || || |||||| || || || || ||||| ||| | Sbjct 622750 TAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAGGAAGCATGAAGACAGCTGGGGC 622809 Query 80329 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGT 80388 || ||| || ||||| |||| || || || ||||| || || | || |||| Sbjct 622810 TGAGGAGTGCCAGCATTGAATAGAGTGGGGGAGGCGTGGGTGAAGAACTTGCTCGACATG 622869 Query 80389 AGATTGTACGTCTCAATAGCTGATTCTATATC----CCATTGATGAATTCCTACCGCGAC 80444 || ||||| ||||||| | || ||||| || |||| || || | || Sbjct 622870 AGGTTGTATGTCTCAAGGACACGCTCAATATCGTCACCCCAGATG----CCAACAGACAC 622925 Query 80445 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGA 80504 |||||| | |||||||||||| | || || |||||||||| || || | | ||| || Sbjct 622926 ACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTGTTATCAATCTTGAGGAGGTATGA 622985 Query 80505 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 80564 | |||| ||| || || ||||| || | |||| ||||| || || || | ||| | Sbjct 622986 TCGCTCCAGAGTCTTGAAGCCAAAGTATTGGTATTGGAAGTCACGGTCATAGACAATGGC 623045 Query 80565 CGAGTTGAGTTTATCCTT 80582 |||| || | ||||| Sbjct 623046 AGAGTCCAGCTCCTCCTT 623063 >seq35 Length=674057 Score = 134 bits (148), Expect = 2e-26 Identities = 367/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||| ||||||||||| | | || || ||||| || || || || Sbjct 115160 CAAGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGA 115101 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || || ||||| || ||||| || ||||| || || | || ||||| Sbjct 115100 CCAGGCATAAGACCGCGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCGCCGCTGAAGAAA 115041 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCA---TAACTGGCGCTGTCATGT 50136 || || || || || || |||||||| || | || || || | |||| || Sbjct 115040 ATACCCTCGACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTGG 114981 Query 50137 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | || |||||||||||||||||| | ||| || || || || || ||||| Sbjct 114980 ATCCATCGGATG-GCCCAATCGGCCTTCTTTCGGATACAGGGGATGGTCTCGATAGCATT 114922 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||||| ||| | | | | || || | ||||| ||||| | || || | Sbjct 114921 GAAGAGGTAGGTGCGCTGAGAAGGCTCCTTGATGTAAGTGTCGATAAGCAGCGAGTAGGT 114862 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || ||||| || || || || ||||| ||||| ||||| |||| ||||| | || Sbjct 114861 CTCAGAATGGATATTCTCCATCATGATCTGGAATCCATAGAAGCATCGGGCCTCAGGGAT 114802 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 ||| || || || || || ||| | | || || || || || || ||| || || Sbjct 114801 CTGGACCTCGCCACTGAACCGCTCAACGAGGTTCTCGTTGACAATGCCATCAGAAGCAGC 114742 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCA 50432 ||| || || | | || | ||| | |||| || |||| | || ||||| Sbjct 114741 AAAGAAGGCAAGGATGTGAGAGACAAAGAACTGCTCGTCGGCAGTTAGGCGGTTGTTCCA 114682 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 ||||| | ||| ||||| | || | || || | ||||| || || ||||| ||||| Sbjct 114681 ATCATGAAGATCCTTAGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTT 114622 Query 50493 TTTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 114621 CTTGTACATCTGCCAGAT 114604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267839315480