Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq30 356 6e-93 >seq30 Length=762562 Score = 356 bits (394), Expect = 6e-93 Identities = 1133/1734 (65%), Gaps = 32/1734 (2%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||||| || ||||| ||||| ||| | |||||||| || |||| ||| | ||| Sbjct 622958 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGTGACGAT 622899 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCAC 363560 |||| | |||| ||||| || || | | || || | ||||| |||||| | Sbjct 622898 ATTGAGCGTGTCCTTGAGACATACAACCTCATGTCGAGCAAGT-TCTTCACCCACGCCTC 622840 Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAA 363620 || || | | ||||||||| |||| | | || ||| ||||||| ||||| || | | Sbjct 622839 CCCCACTCTATTCAATGCTGGCACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGTTGA 622780 Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680 |||||||| || ||| |||||||||| ||| || || |||| ||||| | ||||| Sbjct 622779 CATGAAGGAGGACAGCATTGAGGGTATCTATGATACTCTCAAGACCTGTGCCATGATTTC 622720 Query 363681 CAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTAC 363738 ||||| || || || |||||| | | || | ||| | ||||| || | | ||| Sbjct 622719 CAAGATGGCTGGTGGCATTGGTCTGAACG-TGCACCGCATCCGTGCCACCGG-CTCCTAC 622662 Query 363739 ATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797 || ||| || || |||| | || || | |||||||| || || || |||| Sbjct 622661 ATCGCCGGTACCAACGG-TACTTCCAACGGCGTCACCCCCATGCTCCGAGTCTTCAACAA 622603 Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCT 363857 ||||| | || || ||||||||||| ||||| || || || ||||| || || Sbjct 622602 CACTGCCCGATATGTTGACCAGGGTGGCAACAAGCGACCTGGTGCCTTCGCTATCTACCT 622543 Query 363858 CGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGA 363917 ||||| || | ||| | |||||||| ||||| || || || ||| || || || Sbjct 622542 TGAGCCCTGGCACTCGGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGA 622483 Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977 ||| | || || || || |||||| ||| || ||| | | || | || |||||||| Sbjct 622482 GGAGGTTCGCGCTCGCGACCTGTTCCTTGCTCTCTGGATCCCCGATCTCTTCATGAAGCG 622423 Query 363978 CGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035 || ||| | | | | | ||| | ||| | ||||| | || || || |||||| || Sbjct 622422 TGTTGAG--AAGAACGGCGACTGGACCCTCATGTGCCCTAATGAGTGCCCCGGTCTTGCC 622365 Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095 || | || || || | || ||||| || || ||||| || || || |||| | Sbjct 622364 GACTGCTACGGCGATGAGTTTGAGGCTCTGTATGAGAAGTACGAGCAGGCTGGCAAGGGT 622305 Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155 || ||||| || || |||||||| |||| ||| || | || | |||| ||||| Sbjct 622304 CGCAAGACCATCAAGGCTCAGAAGCTCTGGTATGCTATTCTTGAGGCTCAGACCGAGACT 622245 Query 364156 GGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTT 364215 || | |||| ||| | ||||| || |||||||||||| |||||| || |||| Sbjct 622244 GGCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGTAACCAGAAGAACCTG 622185 Query 364216 GGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGA 364274 ||||| |||| | || | ||| | || || ||||||||||| ||| || || || || Sbjct 622184 GGTACCATTC-GAAGCTCCAACTTGTGCACTGAGATTATTGAGTACTGTGCCCCTGATGA 622126 Query 364275 GACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTAC 364331 | ||| || || ||||| || || |||| || || ||| | | | |||| | Sbjct 622125 GGTTGCTGTGTGCAACCTGGCATCCCTCGCTCTGCCCTCGTACATCAACTACGATGAAGC 622066 Query 364332 ---TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAA 364388 | |||| | || | || | | || ||| | || | |||||||| ||| Sbjct 622065 CTGCTATGACTTCGAGAAGCTGCACAAGGTCACCCAGGTTGTCGTTCGCAATCTCAACAG 622006 Query 364389 GGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCG 364448 | | || || ||| | ||||| | ||||| ||| || |||||||| || Sbjct 622005 GATCATTGATGTGAACCACTATCCTGTCCCTGAGGCCCGCAACAGCAACATGCGTCACCG 621946 Query 364449 CCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCA 364506 || || ||| |||| || ||||| || || || | ||| | ||||| ||| | Sbjct 621945 ACCTATCGGTGTTGGCGTCCAGGGTCTTGCGGATGCTTTCCT--TGCTCTGCGCATGCCC 621888 Query 364507 TTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCC 364566 || || || ||||| ||||||| || || ||| |||| ||||| || || ||| || Sbjct 621887 TTCGAGTCTCCTGAGGCTCGTGAGCTCAACAAGCAGATTTTTGAGACCATCTATCACGCT 621828 Query 364567 GCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG 364625 || | ||||| ||| ||| | |||| || | || ||||| || | |||| Sbjct 621827 GCTCTCACTGCCTCG-GTGCAGCTGGCTAAGGAGGAAGGTCCCTACTCCACCTTCAAGGG 621769 Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685 |||||| ||| |||| | ||||||| ||| | ||||| || | ||| || | || Sbjct 621768 CTCCCCTGCTTCCGAGGGTATCCTCCAGTTCGATATGTGGAACGTGAAGCCCTCCGACCT 621709 Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC---TCCCT 364742 ||| ||||||| || || | | || ||| | || |||| |||||| | || Sbjct 621708 TTGGGACTGGGAGACTCTCAGAGAGCAGGTCAAGGAACACGGTATCCGCAACAGTTTGCT 621649 Query 364743 CGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTT 364802 | || || ||||||||||| || ||| | |||||||| || || ||||||||||| Sbjct 621648 CCTT---GCACCCATGCCCACTGCCAGTACCTCGCAGATCCTGGGCAATAACGAGTGCTT 621592 Query 364803 CGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGT 364862 || || | || ||| | || ||||| || ||| | || || || | ||| || Sbjct 621591 TGAGCCTTACACTTCCAACATCTACCAGCGCCGAGTCCTTGCTGGTGAGTTCCAGGTCGT 621532 Query 364863 TAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAA 364922 || | || |||||||||| |||| || ||||| || ||||||||| Sbjct 621531 GAACCCCTGGCTGCTCAAGGATCTCGTCGACATGGGTTTGTGGTCGGATGCCATGAAGAA 621472 Query 364923 CTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA 364982 | ||||| |||| || || || | |||||||| ||| | || | || | || Sbjct 621471 CCGAATCATTGCCGAGAACGGCTCCATCCAGAACATCCCAAACATCCCTGCCGAAGTCAA 621412 Query 364983 GCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGA 365042 | || | ||||| || || ||||| ||||| ||| || | | ||||| ||||| Sbjct 621411 GGCTCTGTACAAGACTGTGTGGGAGATTTCACAGCGCCAGGTCGTCCAGATGGCTGCCGA 621352 Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTC 365102 || ||||| ||||| |||| |||||| | ||| | ||||| | || ||| Sbjct 621351 CCGAGGTGCCTTTATTGATCAGTCCCAGTCCCTCAACATCCACATGAAGGACCCCACCAT 621292 Query 365103 CGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| | || |||||| ||| || ||||| ||||| ||||| || Sbjct 621291 GGGCAAGATCACCAGCATGCACTTCACAGGCTGGAAGCTTGGTCTCAAGACTGG 621238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351813183674