Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31]
107 sequences; 53,748,257 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq30 165 8e-36
seq20 122 8e-23
seq2 122 8e-23
seq32 89.7 5e-13
>seq30
Length=762562
Score = 165 bits (182), Expect = 8e-36
Identities = 938/1471 (64%), Gaps = 55/1471 (4%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
|| |||||||| ||||| || || | || || ||| || | ||| || ||| | ||
Sbjct 621529 TTCACGACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAGATGTTGGAAGTGTAAGGC 621588
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
||||| ||||||||||||||||||| || | ||| | || ||||||||| || |
Sbjct 621589 TCAAAGCACTCGTTATTGCCCAGGATCTGCGAGGTACTGGCAGTGGGCATGGGTGCAAGG 621648
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || ||||| | ||||| | ||||| | || | || || |||| |||||
Sbjct 621649 AGCAAACTGTTGCGGATACCGTGTTCCTTGACCTGCTCTCTGAGAGTCTCCCAGTCCCAA 621708
Query 145238 AG--CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGC-GGGG 145294
|| || || ||| |||||| |||||| ||| |||| | || |||||| || ||||
Sbjct 621709 AGGTCGGAG--GGCTTCACGTTCCACATATCGAACTGGAGGATACCCTCGGAAGCAGGGG 621766
Query 145295 CTGCCTTGAAAG-GAACT--GTAACTGCCCCAAGTTTTGGCGAGCTCGCAAC-TCGCCTC 145350
||||||| | | | | | | || || | || || |||| ||| | ||
Sbjct 621767 AGCCCTTGAAGGTGGAGTAGGGACCTTCCTC----CTTAGCCAGCT-GCACCGAGGCAGT 621821
Query 145351 CAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCT 145410
||||| || ||| || ||||| ||| ||| |||||||| || |||
Sbjct 621822 GAGAGCAGCGTGATAGATGGTCTCAAAAATCTGCTTGTTGAGCTCACGAGCCTCAGGAGA 621881
Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470
|||| | ||||||||||| | |||||||| || || ||||| | || || |||||
Sbjct 621882 CTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCCGCAAGACCCTGGACGCCAACACCGAT 621941
Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530
|| || || ||||||||| | | ||| || |||||| | || || ||
Sbjct 621942 AGGTCGGTGACGCATGTTGCTGTTGCGGGCCTCAGGGACAGGATAGTGGTTCACATCAAT 622001
Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590
|| | || | || || || || |||| || | | ||| ||| || |||||| |
Sbjct 622002 GATCCTGTTGAGATTGCGAACGACAACCTGGGTGACCTTGTGCAGCTTCTCGAAGTCATA 622061
Query 145591 CCGAGCCTCGTCAACGACCACACAGCTATTG-ACGGCGATCGACGCCAAATTACAAACTG 145649
| || || || | | | | | | | |||| || |||| || || || |
Sbjct 622062 GCAGGCTTCATCGTAGTTGATGTA-CGAGGGCAGAGCGAGGGATGCCAGGTTGCACACAG 622120
Query 145650 CCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGG 145709
| ||| || | | | | ||| | | ||||| | |||||| ||| | | ||||
Sbjct 622121 CAACCTCATCAGGGGCACAGTACTCAATAATCTCAGTGCACAAGTTGGAGCTTCGAATGG 622180
Query 145710 TTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTC 145769
| ||||| || | ||| ||||| || | |||||| |||||||||||||||| | ||
Sbjct 622181 TACCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGT 622240
Query 145770 CGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCT 145829
||||||||| ||| | ||| | ||| | | | || || | | || | || |
Sbjct 622241 TGCCAGTCTCGGTCTGAGCCTCAAGAATAGCA---TACCAGAGCTTCTGA-GC-CTTGAT 622295
Query 145830 GCTGGTAGCGGCCCT------CTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAAC 145883
| | | ||| |||| | | ||||| ||| || || |||||||| | |
Sbjct 622296 GGT-CTTGCGACCCTTGCCAGCCTGCTCGTACTTCTCATACAGAGCCTCAAACTCATCGC 622354
Query 145884 CGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGG 145943
||||||| |||| || ||||| |||| || || ||||| || | ||| |||||||
Sbjct 622355 CGTAGCAGTCGGCAAGACCGGGGCACTCATTAGGGCACATGAGGGTCCAGTCGCCGTTCT 622414
Query 145944 CGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTT 146003
| || |||| ||| || | ||| || | ||| || || | || |||||| ||
Sbjct 622415 TCTCAACACGCTTCATGAAGAGATCGGGGATCCAGAGAGCAAGGAACAGGTCGCGAGC-- 622472
Query 146004 TGCAATCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGC 146058
|| | |||| | || || ||| || || | ||| | ||| | ||| ||||
Sbjct 622473 -GCGAACCTCCTCCTTGCCGTGGTTCTTGC-GCAGGTCAAGGA-ACTCAAAGACATCCGA 622529
Query 146059 GTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCAC 146115
|||||| || |||| |||| |||| ||| || ||| |||||||||||||| ||
Sbjct 622530 GTGCCAGGGCTCAAGGTAGATAGCGAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCAAC 622589
Query 146116 GTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTT 146175
| || | ||||||| ||||| || | |||||| ||||||| ||| |||||
Sbjct 622590 ATATCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGGGTGACGCCGTTGGAAGTACCGTT 622649
Query 146176 CGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC 146235
||| | || || |||| || || | || || || |||| || | || ||
Sbjct 622650 GGTACCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATGCCACC 622709
Query 146236 -GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTAT 146294
||| | |||||| || ||| ||| ||| || || ||||| || |||||||| |
Sbjct 622710 AGCCAT-CTTGGAAATCATGGCACAGGTCTTGAGAGTATCATAGATACCCTCAATGCTGT 622768
Query 146295 C--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGA 146352
| |||| ||| | | ||| ||||| || ||| ||| | | || || || ||
Sbjct 622769 CCTCCTTC--ATGTCAACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGTGCCAGCATT 622826
Query 146353 GAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTTC 146409
||| | || ||| ||||| || || | || |||| ||| | || || ||
Sbjct 622827 GAATAGAGTGGGGGAGGCGTGGGTGAAGAACTT---GCTCGACATGAGGTTGTATGTCTC 622883
Query 146410 GATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTG 146469
| | | ||| ||||| || ||||| | || || ||||||| |||||| ||
Sbjct 622884 AAGGACACGCTCAATATCGTCACCCCAGATGCCAACAGACACACGCATGATCATGTGCTG 622943
Query 146470 GGGCCGCTCCGCCA-CTTGATTGTCAATCTT 146499
|| ||||| | | |||| || ||||||||
Sbjct 622944 AGGGCGCTCGACAATCTTG-TTATCAATCTT 622973
>seq20
Length=1074596
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || | || | || || ||||| ||||||||||| |||||
Sbjct 146811 CCACCACGCAGTCGCAGGACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTG 146870
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| ||||| || || ||| |||| | |||||||| ||||| ||
Sbjct 146871 AGAGTTCGTCCGTCCTCAAGCTGTTTTCCGGCGAAGATAAGTCGCTGCTGATCCGGGGGA 146930
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||| | | || | |||||||| ||||| |
Sbjct 146931 ATGCCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCAATAGTATCGGATGACTCTACC 146990
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || || || ||||| || || || ||||||||
Sbjct 146991 TCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTGACAAAGATCTGCAT 147037
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || | || | || || ||||| || ||||| || |||||
Sbjct 146582 GCCACCACGGAGACGGAGAACCAGGTGAAGAGTAGATTCCTTCTGGATGTTATAGTCGCT 146641
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| |||||| |||||||| || || |||| | ||||||||||| |||||
Sbjct 146642 CAGAGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAGATAAGGCGCTGCTGGTCAGGAGG 146701
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| ||| || ||| | | || | |||||| | ||||| |
Sbjct 146702 AATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTATCGCTTGACTCAAC 146761
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| | || || |||||||| |||||
Sbjct 146762 CTCAAGAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATTTGCAT 146809
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| || |||||||||||| | |||||| ||||| |||||||||||
Sbjct 147700 GTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 147759
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| | || || |||||||||||||| ||||| || || ||||| || || ||||
Sbjct 147760 GCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 147819
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210
| | || | || || | |||||||| |||| ||||| ||| || || ||
Sbjct 147820 ACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTGCCCGT 147872
Score = 100 bits (110), Expect = 3e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| || |||||||||||| | ||| || ||||| || ||||||||
Sbjct 147069 GTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCATCCTCGAGTTGCTTGCCA 147128
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| |||| | |||||| ||||| || ||||| || || ||||| || || ||||
Sbjct 147129 GCAAAGATCAGACGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 147188
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | ||| |||| |||||||| |||| ||||| ||| || || || || ||
Sbjct 147189 ACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTGAGGGTC 147248
Query 131218 TTTAC 131222
|| ||
Sbjct 147249 TTGAC 147253
Score = 93.3 bits (102), Expect = 4e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| || |||||||||||| | |||||| ||||| |||||||||||
Sbjct 147352 GTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 147411
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141
||| | || || |||||||||||||| ||||| || || |||||
Sbjct 147412 GCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 147455
>seq2
Length=1405217
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||| | || | ||| |||||| || |||||||| ||||||
Sbjct 409095 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 409154
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| || |||| | |||||||| ||||| ||
Sbjct 409155 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGA 409214
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 409215 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 409274
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || ||||| || ||||||||||||||
Sbjct 409275 TCAAGGGTGATCGTCTTCCCCGTGAGAGTCTTGACGAAAATCTGCAT 409321
>seq32
Length=2292469
Score = 89.7 bits (98), Expect = 5e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | ||| || ||||| ||||||||||| || |||
Sbjct 449923 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 449982
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||| ||||| || || || || ||||| ||| || ||||| | |
Sbjct 449983 TGAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 450042
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | ||| |||| |||||||| || | ||| | ||| || || || || || || ||||
Sbjct 450043 CGATAGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 450102
Query 131225 AA 131226
||
Sbjct 450103 AA 450104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012168682880
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