Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq30 165 8e-36 seq20 122 8e-23 seq2 122 8e-23 seq32 89.7 5e-13 >seq30 Length=762562 Score = 165 bits (182), Expect = 8e-36 Identities = 938/1471 (64%), Gaps = 55/1471 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || |||||||| ||||| || || | || || ||| || | ||| || ||| | || Sbjct 621529 TTCACGACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAGATGTTGGAAGTGTAAGGC 621588 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||||||||||||||| || | ||| | || ||||||||| || | Sbjct 621589 TCAAAGCACTCGTTATTGCCCAGGATCTGCGAGGTACTGGCAGTGGGCATGGGTGCAAGG 621648 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || ||||| | ||||| | ||||| | || | || || |||| ||||| Sbjct 621649 AGCAAACTGTTGCGGATACCGTGTTCCTTGACCTGCTCTCTGAGAGTCTCCCAGTCCCAA 621708 Query 145238 AG--CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGC-GGGG 145294 || || || ||| |||||| |||||| ||| |||| | || |||||| || |||| Sbjct 621709 AGGTCGGAG--GGCTTCACGTTCCACATATCGAACTGGAGGATACCCTCGGAAGCAGGGG 621766 Query 145295 CTGCCTTGAAAG-GAACT--GTAACTGCCCCAAGTTTTGGCGAGCTCGCAAC-TCGCCTC 145350 ||||||| | | | | | | || || | || || |||| ||| | || Sbjct 621767 AGCCCTTGAAGGTGGAGTAGGGACCTTCCTC----CTTAGCCAGCT-GCACCGAGGCAGT 621821 Query 145351 CAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCT 145410 ||||| || ||| || ||||| ||| ||| |||||||| || ||| Sbjct 621822 GAGAGCAGCGTGATAGATGGTCTCAAAAATCTGCTTGTTGAGCTCACGAGCCTCAGGAGA 621881 Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470 |||| | ||||||||||| | |||||||| || || ||||| | || || ||||| Sbjct 621882 CTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCCGCAAGACCCTGGACGCCAACACCGAT 621941 Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530 || || || ||||||||| | | ||| || |||||| | || || || Sbjct 621942 AGGTCGGTGACGCATGTTGCTGTTGCGGGCCTCAGGGACAGGATAGTGGTTCACATCAAT 622001 Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590 || | || | || || || || |||| || | | ||| ||| || |||||| | Sbjct 622002 GATCCTGTTGAGATTGCGAACGACAACCTGGGTGACCTTGTGCAGCTTCTCGAAGTCATA 622061 Query 145591 CCGAGCCTCGTCAACGACCACACAGCTATTG-ACGGCGATCGACGCCAAATTACAAACTG 145649 | || || || | | | | | | | |||| || |||| || || || | Sbjct 622062 GCAGGCTTCATCGTAGTTGATGTA-CGAGGGCAGAGCGAGGGATGCCAGGTTGCACACAG 622120 Query 145650 CCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGG 145709 | ||| || | | | | ||| | | ||||| | |||||| ||| | | |||| Sbjct 622121 CAACCTCATCAGGGGCACAGTACTCAATAATCTCAGTGCACAAGTTGGAGCTTCGAATGG 622180 Query 145710 TTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTC 145769 | ||||| || | ||| ||||| || | |||||| |||||||||||||||| | || Sbjct 622181 TACCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGT 622240 Query 145770 CGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCT 145829 ||||||||| ||| | ||| | ||| | | | || || | | || | || | Sbjct 622241 TGCCAGTCTCGGTCTGAGCCTCAAGAATAGCA---TACCAGAGCTTCTGA-GC-CTTGAT 622295 Query 145830 GCTGGTAGCGGCCCT------CTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAAC 145883 | | | ||| |||| | | ||||| ||| || || |||||||| | | Sbjct 622296 GGT-CTTGCGACCCTTGCCAGCCTGCTCGTACTTCTCATACAGAGCCTCAAACTCATCGC 622354 Query 145884 CGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGG 145943 ||||||| |||| || ||||| |||| || || ||||| || | ||| ||||||| Sbjct 622355 CGTAGCAGTCGGCAAGACCGGGGCACTCATTAGGGCACATGAGGGTCCAGTCGCCGTTCT 622414 Query 145944 CGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTT 146003 | || |||| ||| || | ||| || | ||| || || | || |||||| || Sbjct 622415 TCTCAACACGCTTCATGAAGAGATCGGGGATCCAGAGAGCAAGGAACAGGTCGCGAGC-- 622472 Query 146004 TGCAATCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGC 146058 || | |||| | || || ||| || || | ||| | ||| | ||| |||| Sbjct 622473 -GCGAACCTCCTCCTTGCCGTGGTTCTTGC-GCAGGTCAAGGA-ACTCAAAGACATCCGA 622529 Query 146059 GTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCAC 146115 |||||| || |||| |||| |||| ||| || ||| |||||||||||||| || Sbjct 622530 GTGCCAGGGCTCAAGGTAGATAGCGAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCAAC 622589 Query 146116 GTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTT 146175 | || | ||||||| ||||| || | |||||| ||||||| ||| ||||| Sbjct 622590 ATATCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGGGTGACGCCGTTGGAAGTACCGTT 622649 Query 146176 CGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC 146235 ||| | || || |||| || || | || || || |||| || | || || Sbjct 622650 GGTACCGGCGATGTAGGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATGCCACC 622709 Query 146236 -GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTAT 146294 ||| | |||||| || ||| ||| ||| || || ||||| || |||||||| | Sbjct 622710 AGCCAT-CTTGGAAATCATGGCACAGGTCTTGAGAGTATCATAGATACCCTCAATGCTGT 622768 Query 146295 C--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGA 146352 | |||| ||| | | ||| ||||| || ||| ||| | | || || || || Sbjct 622769 CCTCCTTC--ATGTCAACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGTGCCAGCATT 622826 Query 146353 GAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTTC 146409 ||| | || ||| ||||| || || | || |||| ||| | || || || Sbjct 622827 GAATAGAGTGGGGGAGGCGTGGGTGAAGAACTT---GCTCGACATGAGGTTGTATGTCTC 622883 Query 146410 GATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTG 146469 | | | ||| ||||| || ||||| | || || ||||||| |||||| || Sbjct 622884 AAGGACACGCTCAATATCGTCACCCCAGATGCCAACAGACACACGCATGATCATGTGCTG 622943 Query 146470 GGGCCGCTCCGCCA-CTTGATTGTCAATCTT 146499 || ||||| | | |||| || |||||||| Sbjct 622944 AGGGCGCTCGACAATCTTG-TTATCAATCTT 622973 >seq20 Length=1074596 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| || | || | || || ||||| ||||||||||| ||||| Sbjct 146811 CCACCACGCAGTCGCAGGACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTG 146870 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||| || || ||| |||| | |||||||| ||||| || Sbjct 146871 AGAGTTCGTCCGTCCTCAAGCTGTTTTCCGGCGAAGATAAGTCGCTGCTGATCCGGGGGA 146930 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | |||||||| ||||| | Sbjct 146931 ATGCCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCAATAGTATCGGATGACTCTACC 146990 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || || || ||||| || || || |||||||| Sbjct 146991 TCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTGACAAAGATCTGCAT 147037 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | || || ||||| || ||||| || ||||| Sbjct 146582 GCCACCACGGAGACGGAGAACCAGGTGAAGAGTAGATTCCTTCTGGATGTTATAGTCGCT 146641 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| |||||||| || || |||| | ||||||||||| ||||| Sbjct 146642 CAGAGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAGATAAGGCGCTGCTGGTCAGGAGG 146701 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||| | | || | |||||| | ||||| | Sbjct 146702 AATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTATCGCTTGACTCAAC 146761 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| | || || |||||||| ||||| Sbjct 146762 CTCAAGAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATTTGCAT 146809 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||||||| | |||||| ||||| ||||||||||| Sbjct 147700 GTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 147759 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || || |||||||||||||| ||||| || || ||||| || || |||| Sbjct 147760 GCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 147819 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | | || | || || | |||||||| |||| ||||| ||| || || || Sbjct 147820 ACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTGCCCGT 147872 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||||||| | ||| || ||||| || |||||||| Sbjct 147069 GTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCATCCTCGAGTTGCTTGCCA 147128 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | |||||| ||||| || ||||| || || ||||| || || |||| Sbjct 147129 GCAAAGATCAGACGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 147188 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||| |||| |||||||| |||| ||||| ||| || || || || || Sbjct 147189 ACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTGAGGGTC 147248 Query 131218 TTTAC 131222 || || Sbjct 147249 TTGAC 147253 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||||||| | |||||| ||||| ||||||||||| Sbjct 147352 GTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 147411 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| | || || |||||||||||||| ||||| || || ||||| Sbjct 147412 GCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 147455 >seq2 Length=1405217 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||| |||||| || |||||||| |||||| Sbjct 409095 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 409154 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||| | |||||||| ||||| || Sbjct 409155 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGA 409214 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 409215 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 409274 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || ||||| || |||||||||||||| Sbjct 409275 TCAAGGGTGATCGTCTTCCCCGTGAGAGTCTTGACGAAAATCTGCAT 409321 >seq32 Length=2292469 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | ||| || ||||| ||||||||||| || ||| Sbjct 449923 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 449982 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||| ||||| || || || || ||||| ||| || ||||| | | Sbjct 449983 TGAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 450042 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||| |||| |||||||| || | ||| | ||| || || || || || || |||| Sbjct 450043 CGATAGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 450102 Query 131225 AA 131226 || Sbjct 450103 AA 450104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012168682880