Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq20 96.9 3e-15 >seq20 Length=1074596 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||| ||||| | |||| | | ||||| | ||| Sbjct 147063 TGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCATCCTCGAGTTGC 147122 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||||||||| || | |||||| ||||| ||| | Sbjct 147123 TTGCCAGCAAAGATCAGACGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTG 147182 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||||| || ||| || | ||| ||||| || || || Sbjct 147183 GACTTGACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTG 147242 Query 16913 AGCGTTTTGACAA 16925 || || ||||||| Sbjct 147243 AGGGTCTTGACAA 147255 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||||| || || ||||| || |||||||||||| Sbjct 146811 CCACCACGCAGTCGCAGGACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTG 146870 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| ||||||| | ||||| || || | ||||| ||||| || ||| || Sbjct 146871 AGAGTTCGTCCGTCCTCAAGCTGTTTTCCGGCGAAGATAAGTCGCTGCTGATCCGGGGGA 146930 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | | ||| || | | | | ||| ||| | ||| Sbjct 146931 ATGCCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCAATAGTATCGGATGACTCTACC 146990 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| ||||| || || || |||||||| |||||||| Sbjct 146991 TCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTGACAAAGATCTGCAT 147037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087471739930