Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq35 95.1 8e-15 >seq35 Length=674057 Score = 95.1 bits (104), Expect = 8e-15 Identities = 199/294 (68%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCG-CATCTGCGCCAAGGTCGAGGGTAAGGGAAA 6253 ||||| ||||| || ||||| ||| ||| | || | | ||| | || || || ||||| Sbjct 174103 GACGCCTTCTATCGTTACAAGATGGAGCGTCTTCAGA-CAAAGATTGAAGGCAAAGGAAA 174045 Query 6254 CGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGC 6313 |||||| || |||||| | |||||| || || || |||||| || || | Sbjct 174044 CGGTATCAAGACCGTCGTCGTCAACCTGAGCAGCGTTGCCGCTTCGCTCGCCCGTCCCGG 173985 Query 6314 CACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373 | |||| | || || || || | ||| ||||| |||||||| | | || | ||| Sbjct 173984 CTCCTATGTCATCAAGTACTTTGGTTTCGAGCTTGGTGCTCAGACCAACATCGACCCCAA 173925 Query 6374 AAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGA 6433 |||| || | ||| | ||||| | ||| || |||||||||| |||||| || || Sbjct 173924 GGACGACCGTTGGATCATCAACGGCGCCCATGACGCTGCCAAGCTCCAGGACCACCTCGA 173865 Query 6434 CGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| || |||||| || || || | | ||| | || || |||||||| Sbjct 173864 TGGCTTCATCAACAAGTTCGTTCTCTGCAAGAAGTGCAAGAATCCTGAGACCGA 173811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946763207917