Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq30 167 3e-36 >seq30 Length=762562 Score = 167 bits (184), Expect = 3e-36 Identities = 459/701 (65%), Gaps = 12/701 (2%) Strand=Plus/Plus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || || || || |||| || ||||| | | ||| || |||| | || || || ||| Sbjct 622369 AGACCGGGGCACTCATTAGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTC 622428 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || |||||||| || ||||| ||||| | || || || | | | | ||||| || Sbjct 622429 ATGAAGAGATCGGGGATCCAGAGAGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTG 622488 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| || || |||||| | | | ||| || ||||| || || | ||| Sbjct 622489 CCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAG 622548 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 || || | | ||||| || ||||| || ||||| || | |||| || ||||| || Sbjct 622549 ATAGCGAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCGGGCAGTGTTGTTG 622608 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | |||| | ||| || | | || ||||| ||||| ||||| || | ||| ||| Sbjct 622609 AAGACTCGGAGCATGGGGGTGACGCCGTTGGAAGTACCGTTGGTACCGGCGATGTAGGAG 622668 Query 63320 CCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 || ||||||| || | | || | |||| || || || ||||| || || || | Sbjct 622669 CCGGTGGCACGGATGCGGTGCACGTTCA--GACCAATGCCACCAGCCATCTTGGAAATCA 622726 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | ||||||||||| ||||| || || || ||| |||||| || | Sbjct 622727 TGGCACAGGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCA 622786 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || || ||||| ||| | || ||| || ||||| |||| || || || |||| Sbjct 622787 GGAAGCATGAAGACAGCTGGGGCTGAGGAGTGCCAGCATTGAATAGAGTGGGGGAGGCGT 622846 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC----C 63553 | || || | || || | || ||||| ||||||| | || ||||| | Sbjct 622847 GGGTGAAGAACTTGCTCGACATGAGGTTGTATGTCTCAAGGACACGCTCAATATCGTCAC 622906 Query 63554 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63613 | |||| || || | |||||||| | |||||||||||| | || || |||||| Sbjct 622907 CCCAGATG----CCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTG 622962 Query 63614 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 63673 || | || || | | ||| ||| |||| ||| || || ||||| || | |||| Sbjct 622963 TTATCAATCTTGAGGAGGTATGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGGTATTGG 623022 Query 63674 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714 ||||| || || || | ||| | |||| || | ||||| Sbjct 623023 AAGTCACGGTCATAGACAATGGCAGAGTCCAGCTCCTCCTT 623063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631152517200