Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq20 98.7 9e-16 >seq20 Length=1074596 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/196 (72%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 25009 TTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCG 25068 |||| ||||| | || || || |||| || |||| || ||||| || |||||||||| Sbjct 147255 TTGTCAAGACCCTCACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCCGACACTATCG 147196 Query 25069 AGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 | || || ||| | || | ||| ||||| || || || || |||||||||||||| Sbjct 147195 A--CAATGTCAAGTCCAAGATTCAG-GACAAGGAGGGCATCCCCCCTGACCAACAGCGTC 147139 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || ||||| ||||| ||| | || |||| || || | | ||||||||| || || | Sbjct 147138 TGATCTTTGCTGGCAAGCAACTCGAGGATGGCCGAACCCTCGCCGATTACAACATCCAGA 147079 Query 25186 AAGAATCCACGCTACA 25201 | || ||||| || || Sbjct 147078 AGGAGTCCACTCTCCA 147063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327434913205