Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq30 239 5e-58 seq35 131 2e-25 >seq30 Length=762562 Score = 239 bits (264), Expect = 5e-58 Identities = 899/1391 (65%), Gaps = 52/1391 (4%) Strand=Plus/Plus Query 113565 TGAACTGAAT-GGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGC 113623 |||| ||||| ||| || ||| ||||| | ||| ||||||||||| || |||||||| Sbjct 621191 TGAATTGAATAGGGGCT-GCCGCGGCCTGCGTTCGCAGGTAGTACATGCCAGTCTTGAGA 621249 Query 113624 CCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 113683 || |||||||| | | ||||| || | |||| | || || | |||| Sbjct 621250 CCAAGCTTCCAGCCTGTGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATG 621309 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||| | ||||| ||||| || ||| || || || || ||||| | | Sbjct 621310 TGGATGTTGAGGGACTGGGACTGATCAATAAAGGCACCTCGGTCGGCAGCCATCTGGACG 621369 Query 113744 ACATCCTTCATCT-TGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 || || || ||| | ||||||||||| |||| || ||| | || | ||| Sbjct 621370 AC---CTGGCGCTGTGAAATCTCCCACACAGTCTTGTACAGAGCCTTGACTTCGGCAGGG 621426 Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGA---GATCCTTCATATCC 113857 || | ||| || ||||||||||| | | | | |||| | | |||||| | Sbjct 621427 ATGTTTGGGATGTTCTGGATGGAGCCGTTCTC---GGCAATGATTCGGTTCTTCATGGCA 621483 Query 113858 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAAC 113917 | ||||| | ||| || | |||||||| | || || || || ||| Sbjct 621484 TCCGACCACAAACCCATGTCGACGAGATCCTTGAGCAGCCAGGGGTTCACGACCTGGAAC 621543 Query 113918 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 113977 ||||| || ||| || | | | ||||| |||| ||||| |||||||||||||| || Sbjct 621544 TCACCAGCAAGGACTCGGCGCTGGTAGATGTTGGAAGTGTAAGGCTCAAAGCACTCGTTA 621603 Query 113978 TTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 114037 || |||| ||| || | ||| ||| |||||||||||||| | ||| | ||||| ||| Sbjct 621604 TTGCCCAGGATCTGCGAGGTACTGGCAGTGGGCATGGGTGCAAGGAGCAAACTGTTGCGG 621663 Query 114038 AGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA---GT-TGAGCTTTGT 114093 | ||| | |||| | | | || |||| | |||||||| | || ||| | Sbjct 621664 ATACCGTGTTCCTTGACCTGCTCTCTGAGAGTCTCCCAGTCCCAAAGGTCGGAG----GG 621719 Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153 || | | | ||||||||| |||||||||||||| | ||| || || || |||| || || Sbjct 621720 CTTCACGTTCCACATATCGAACTGGAGGATACCCTCGGAAGCAGGGGAGCCCTTGAAGGT 621779 Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATA 114210 ||| || || || ||| |||| | | ||| || ||| || |||||||| Sbjct 621780 GGAGTAGGGACCTTCCTCCTTAGCCAGCTGCACCGAG---GCAGTGAGAGCAGCGTGATA 621836 Query 114211 CATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 114270 || ||||||||||| | || | | ||||| || || || | | | Sbjct 621837 GATGGTCTCAAAAATCTGCTTGTTGAGCTCACGAGCCTCAGGAGACTCGAA-GGGCATGC 621895 Query 114271 GCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 114329 ||| | || || ||||||| ||||| ||||| || | || || || || || | || Sbjct 621896 GCAGAGCAAGGAAAGCATCCGCAAGACCCTGGACGCCAACACCGATAGGTCGGTGACGCA 621955 Query 114330 TATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTA 114386 | || || || || ||| || ||||| ||| ||| || | ||| || | Sbjct 621956 TGTTGCTGTTGCG---GGCCTCAGGGACAGGATAGTGGTTCACATCAATGATCCTGTTGA 622012 Query 114387 GATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC- 114445 |||| |||||||| |||| | || ||||| ||| | ||| | | | | || Sbjct 622013 GATTGCGAACGACAACCTGGGTGACCTTGTGCAGCTTCTCGAAGTCATAGCAG-GCTTCA 622071 Query 114446 TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC 114505 || | |||| ||| || || |||| || ||||| || ||||||| |||||| Sbjct 622072 TCGTAGTTGATGTACGAGGGCAGAGCGAGGGATGCCAGGTTGCACACAGCAACCTCATCA 622131 Query 114506 TTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTC 114565 || |||||| ||||| || || ||||| || || || |||||| |||| |||| Sbjct 622132 GGGGCACAGTACTCAATAATCTCAGTGCACAAGTTGGAGCTTCGAATGGTACCCAGGTTC 622191 Query 114566 TTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625 || || || ||| ||| || |||||||| |||||| | || | || ||||| Sbjct 622192 TTCTGGTTACTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCG 622251 Query 114626 GTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCG 114684 || || | || |||||||| | ||||| | || | | || | ||| ||| || Sbjct 622252 GTCTGAGCCTCAAGAATAGCATACCAGAGCTTCTGAGCCTTG----ATGGTCTTG---CG 622304 Query 114685 CCCCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTC 114738 |||| ||| ||||||||| || || || |||||||| || || | || Sbjct 622305 ACCCTTGCCAGCCTGCTCGTACTTCTCATACAGAGCCTCAAACTCATCGCCGTAGCAGTC 622364 Query 114739 TGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACG 114798 | || || || || || ||||| | ||| | ||| | || || ||||||||| Sbjct 622365 GGCAAGACCGGGGCACTCATTAGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACG 622424 Query 114799 CTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTC 114858 |||||||||||| || |||||||||||||| ||| || || ||| |||| | || || Sbjct 622425 CTTCATGAAGAGATCGGGGATCCAGAGAGCAAGGAACAGGTCGCGAGCGCGAACCTCCTC 622484 Query 114859 ATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAG 114918 | || || || |||| || | || || | || ||||| |||||| || || || Sbjct 622485 CTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAG 622544 Query 114919 GTACACCGCGA 114929 ||| | |||| Sbjct 622545 GTAGATAGCGA 622555 >seq35 Length=674057 Score = 131 bits (144), Expect = 2e-25 Identities = 356/539 (66%), Gaps = 16/539 (3%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 115446 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCAT 115387 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 || || || ||||| || || | | || | | ||| | | ||| || Sbjct 115386 GAAGTCGAAGGGGTTGGAAGACTTATAGACCTTCTCGTTACCAAGAGCGAC--GAGTAGT 115329 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | ||| |||||||||||| ||| || | ||||| |||| ||| | Sbjct 115328 CGGTCAGCAACGAACTCAATGTACTGCTTCATGAGGTCGGCATTCATGCCGAGCAGGGCA 115269 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || || || || | |||| ||| ||| || | |||||| || | |||| | Sbjct 115268 CAAGGCAGAGCCTCGGTAAGGAACTCCTGCTCGATGTTCACGGCATCAGTAATGATGTCC 115209 Query 125996 TGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052 |||||| | | | || | | ||| | | | || ||| || | |||| Sbjct 115208 TGAATGACCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CAAG-CAAAG 115152 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 || |||||||||||||||||| |||||||| || || ||||| ||| || ||||| Sbjct 115151 TCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGACCAGGCATA 115092 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 ||||| |||||||| | |||||| || | | || | || |||||| || ||||| Sbjct 115091 AGACCGCGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCGCCGCTGAAGAAAATACCCTCG 115032 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCAC 126229 ||| ||||| |||| ||||||| |||||||| || || |||| | ||| Sbjct 115031 ACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGA---AGAGTTCTTGTCCTGGATCCAT 114975 Query 126230 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 || ||||| | ||||| || |||||| |||| ||||| ||| || | ||||| Sbjct 114974 CGGATGGCCCAATCGGCCTTCTTTCGGATACAGGGGATGGTCTCGATAGCATTGAAGAG 114916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352801039560