Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31]
107 sequences; 53,748,257 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq30 239 5e-58
seq35 131 2e-25
>seq30
Length=762562
Score = 239 bits (264), Expect = 5e-58
Identities = 899/1391 (65%), Gaps = 52/1391 (4%)
Strand=Plus/Plus
Query 113565 TGAACTGAAT-GGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGC 113623
|||| ||||| ||| || ||| ||||| | ||| ||||||||||| || ||||||||
Sbjct 621191 TGAATTGAATAGGGGCT-GCCGCGGCCTGCGTTCGCAGGTAGTACATGCCAGTCTTGAGA 621249
Query 113624 CCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 113683
|| |||||||| | | ||||| || | |||| | || || | ||||
Sbjct 621250 CCAAGCTTCCAGCCTGTGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATG 621309
Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743
|| ||| | ||||| ||||| || ||| || || || || ||||| | |
Sbjct 621310 TGGATGTTGAGGGACTGGGACTGATCAATAAAGGCACCTCGGTCGGCAGCCATCTGGACG 621369
Query 113744 ACATCCTTCATCT-TGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800
|| || || ||| | ||||||||||| |||| || ||| | || | |||
Sbjct 621370 AC---CTGGCGCTGTGAAATCTCCCACACAGTCTTGTACAGAGCCTTGACTTCGGCAGGG 621426
Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGA---GATCCTTCATATCC 113857
|| | ||| || ||||||||||| | | | | |||| | | |||||| |
Sbjct 621427 ATGTTTGGGATGTTCTGGATGGAGCCGTTCTC---GGCAATGATTCGGTTCTTCATGGCA 621483
Query 113858 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAAC 113917
| ||||| | ||| || | |||||||| | || || || || |||
Sbjct 621484 TCCGACCACAAACCCATGTCGACGAGATCCTTGAGCAGCCAGGGGTTCACGACCTGGAAC 621543
Query 113918 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 113977
||||| || ||| || | | | ||||| |||| ||||| |||||||||||||| ||
Sbjct 621544 TCACCAGCAAGGACTCGGCGCTGGTAGATGTTGGAAGTGTAAGGCTCAAAGCACTCGTTA 621603
Query 113978 TTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 114037
|| |||| ||| || | ||| ||| |||||||||||||| | ||| | ||||| |||
Sbjct 621604 TTGCCCAGGATCTGCGAGGTACTGGCAGTGGGCATGGGTGCAAGGAGCAAACTGTTGCGG 621663
Query 114038 AGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA---GT-TGAGCTTTGT 114093
| ||| | |||| | | | || |||| | |||||||| | || ||| |
Sbjct 621664 ATACCGTGTTCCTTGACCTGCTCTCTGAGAGTCTCCCAGTCCCAAAGGTCGGAG----GG 621719
Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153
|| | | | ||||||||| |||||||||||||| | ||| || || || |||| || ||
Sbjct 621720 CTTCACGTTCCACATATCGAACTGGAGGATACCCTCGGAAGCAGGGGAGCCCTTGAAGGT 621779
Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATA 114210
||| || || || ||| |||| | | ||| || ||| || ||||||||
Sbjct 621780 GGAGTAGGGACCTTCCTCCTTAGCCAGCTGCACCGAG---GCAGTGAGAGCAGCGTGATA 621836
Query 114211 CATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 114270
|| ||||||||||| | || | | ||||| || || || | | |
Sbjct 621837 GATGGTCTCAAAAATCTGCTTGTTGAGCTCACGAGCCTCAGGAGACTCGAA-GGGCATGC 621895
Query 114271 GCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 114329
||| | || || ||||||| ||||| ||||| || | || || || || || | ||
Sbjct 621896 GCAGAGCAAGGAAAGCATCCGCAAGACCCTGGACGCCAACACCGATAGGTCGGTGACGCA 621955
Query 114330 TATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTA 114386
| || || || || ||| || ||||| ||| ||| || | ||| || |
Sbjct 621956 TGTTGCTGTTGCG---GGCCTCAGGGACAGGATAGTGGTTCACATCAATGATCCTGTTGA 622012
Query 114387 GATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC- 114445
|||| |||||||| |||| | || ||||| ||| | ||| | | | | ||
Sbjct 622013 GATTGCGAACGACAACCTGGGTGACCTTGTGCAGCTTCTCGAAGTCATAGCAG-GCTTCA 622071
Query 114446 TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC 114505
|| | |||| ||| || || |||| || ||||| || ||||||| ||||||
Sbjct 622072 TCGTAGTTGATGTACGAGGGCAGAGCGAGGGATGCCAGGTTGCACACAGCAACCTCATCA 622131
Query 114506 TTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTC 114565
|| |||||| ||||| || || ||||| || || || |||||| |||| ||||
Sbjct 622132 GGGGCACAGTACTCAATAATCTCAGTGCACAAGTTGGAGCTTCGAATGGTACCCAGGTTC 622191
Query 114566 TTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625
|| || || ||| ||| || |||||||| |||||| | || | || |||||
Sbjct 622192 TTCTGGTTACTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCG 622251
Query 114626 GTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCG 114684
|| || | || |||||||| | ||||| | || | | || | ||| ||| ||
Sbjct 622252 GTCTGAGCCTCAAGAATAGCATACCAGAGCTTCTGAGCCTTG----ATGGTCTTG---CG 622304
Query 114685 CCCCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTC 114738
|||| ||| ||||||||| || || || |||||||| || || | ||
Sbjct 622305 ACCCTTGCCAGCCTGCTCGTACTTCTCATACAGAGCCTCAAACTCATCGCCGTAGCAGTC 622364
Query 114739 TGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACG 114798
| || || || || || ||||| | ||| | ||| | || || |||||||||
Sbjct 622365 GGCAAGACCGGGGCACTCATTAGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACG 622424
Query 114799 CTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTC 114858
|||||||||||| || |||||||||||||| ||| || || ||| |||| | || ||
Sbjct 622425 CTTCATGAAGAGATCGGGGATCCAGAGAGCAAGGAACAGGTCGCGAGCGCGAACCTCCTC 622484
Query 114859 ATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAG 114918
| || || || |||| || | || || | || ||||| |||||| || || ||
Sbjct 622485 CTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAG 622544
Query 114919 GTACACCGCGA 114929
||| | ||||
Sbjct 622545 GTAGATAGCGA 622555
>seq35
Length=674057
Score = 131 bits (144), Expect = 2e-25
Identities = 356/539 (66%), Gaps = 16/539 (3%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| || || ||||||||||||||||| ||||| || | | | ||| ||||||||
Sbjct 115446 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCAT 115387
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875
|| || || ||||| || || | | || | | ||| | | ||| ||
Sbjct 115386 GAAGTCGAAGGGGTTGGAAGACTTATAGACCTTCTCGTTACCAAGAGCGAC--GAGTAGT 115329
Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935
|| || | ||| |||||||||||| ||| || | ||||| |||| ||| |
Sbjct 115328 CGGTCAGCAACGAACTCAATGTACTGCTTCATGAGGTCGGCATTCATGCCGAGCAGGGCA 115269
Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995
|| || || || || | |||| ||| ||| || | |||||| || | |||| |
Sbjct 115268 CAAGGCAGAGCCTCGGTAAGGAACTCCTGCTCGATGTTCACGGCATCAGTAATGATGTCC 115209
Query 125996 TGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052
|||||| | | | || | | ||| | | | || ||| || | ||||
Sbjct 115208 TGAATGACCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CAAG-CAAAG 115152
Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112
|| |||||||||||||||||| |||||||| || || ||||| ||| || |||||
Sbjct 115151 TCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGACCAGGCATA 115092
Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172
||||| |||||||| | |||||| || | | || | || |||||| || |||||
Sbjct 115091 AGACCGCGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCGCCGCTGAAGAAAATACCCTCG 115032
Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCAC 126229
||| ||||| |||| ||||||| |||||||| || || |||| | |||
Sbjct 115031 ACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGA---AGAGTTCTTGTCCTGGATCCAT 114975
Query 126230 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288
|| ||||| | ||||| || |||||| |||| ||||| ||| || | |||||
Sbjct 114974 CGGATGGCCCAATCGGCCTTCTTTCGGATACAGGGGATGGTCTCGATAGCATTGAAGAG 114916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352801039560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |