Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq30 288 1e-72 >seq30 Length=762562 Score = 288 bits (318), Expect = 1e-72 Identities = 1081/1671 (65%), Gaps = 42/1671 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||||||||| || |||||||||||||| ||| || | Sbjct 623018 TACCAATACTTTGGCTTCAAGACTCTGGAGCGATCATACCTCCTCAAGATTGATAACAAG 622959 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || || || |||| Sbjct 622958 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGTGACGAT 622899 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | ||| | | | | || |||| | |||| | ||| ||| || Sbjct 622898 ATTGAGCGTGTCCTTGAGACATACAACCTCATGTCGAGCAAGTTCTTCACCCACGCCTCC 622839 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956 || || || ||||| || || || || ||| ||| ||||||| || |||||| | ||| Sbjct 622838 CCCACTCTATTCAATGCTGGCACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGTTGAC 622779 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| ||| || || | || | |||||| |||||| | || || Sbjct 622778 -ATGAAGGAGGACAGCATTGAGGGTATCTATGATACTCTCAAGACCTGTGCCATGATTTC 622720 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || || || || || || | | || ||| | | ||||||| || |||||||| Sbjct 622719 CAAGATGGCTGGTGGCATTGGTCTGAACGTGCACCGCATCCGTGCCACCGGCTCCTACAT 622660 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 | ||||||||| || || ||||||||| || ||| |||||||| |||||||||||| | Sbjct 622659 CGCCGGTACCAACGGTACTTCCAACGGCGTCACCCCCATGCTCCGAGTCTTCAACAACAC 622600 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || || || || ||||||||||| | | | ||| | ||||| |||| || || Sbjct 622599 TGCCCGATATGTTGACCAGGGTGGCAACAAGCGACCTGGTGCCTTCGCTATCTACCTTGA 622540 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 |||||||||| |||| || | ||| | |||||||| |||||||||||||| || Sbjct 622539 GCCCTGGCACTCGGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGA 622480 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 || | || | ||||| ||| ||||||||| | || || || || ||||| || || Sbjct 622479 GGTTCGCGCTCGCGACCTGTTCCTTGCTCTCTGGATCCCCGATCTCTTCATGAAGCGTGT 622420 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-- 94374 ||||| ||| || ||||| || | || || ||||| || ||||| || ||||| Sbjct 622419 TGAGAAGAACGGCGACTGGACCCTCATGTGCCCTAATGAGTGCCCCGGTCTTGCCGACTG 622360 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAG---GGCAAGGCC 94431 | | ||| | | ||||| | |||||| ||||| |||| ||||||| Sbjct 622359 CTACGGCGAT-GAG-TTTGAGGCTCTGTATGAGAAGTACGA---GCAGGCTGGCAAGGGT 622305 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | ||| || | ||| |||||| ||| || || | || | ||| ||||| Sbjct 622304 CGCAAGACCATCAAGGCTCAGAAGCTCTGGTATGCTATTCTTGAGGCTCAGACCGAGACT 622245 Query 94492 GGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || | |||| ||| | | |||||| | ||| |||| |||| |||||| || |||| Sbjct 622244 GGCAACCCCTTCATGCTCTACAAGGACCACTG-CAACCGCAAGAGTAACCAGAAGAACCT 622186 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 || || ||||| || ||||||| |||||| | ||||| | | || || || Sbjct 622185 GGGTACCATTCGAAGCTCCAACTTGTGCACTGAGATTATTGAGTACTGTGCCCCTGATGA 622126 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-A 94669 | |||||||||| ||||||| ||| || ||| || |||| | || | || | Sbjct 622125 GGTTGCTGTGTGCAACCTGGCATCCCTCGCTCTGCCC----TCGT---ACAT--CAACTA 622075 Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GTCTT 94727 || | || | | || | ||| |||| || || | ||| || || Sbjct 622074 CG-ATGAAGCCTGCTATGACTTCGAGAAGCTGCACAAGGTCAC--CCAGGTTGTCGTTCG 622018 Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787 || || |||||| | || || |||| ||| || ||||| ||||| ||| || Sbjct 622017 CAATCTCAACAGGATCATTGATGTGAACCACTATCCTGTCCCTGAGGCCCGCAACAGCAA 621958 Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847 | || || || || ||||| | |||||||||||| | ||||| || | | | Sbjct 621957 CATGCGTCACCGACCTATCGGTGTTGGCGTCCAGGGTCTTGCGGATGCTTTCCTTGCTCT 621898 Query 94848 GCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907 ||| |||||| ||| ||| || || | | || | | || || || | ||| Sbjct 621897 GCGCATGCCCTTCGAGTCTCCTGAGGCTCGTGAGCTCAACAAGCAGATTTTTGAGACCAT 621838 Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGA 94967 ||| ||| || | | || || || |||| | ||| | || || || Sbjct 621837 CTATCACGCTGCTCTCACTGCCTCGGTGCAGCTGGCTA---AGGAGGAAGGTCCCTACTC 621781 Query 94968 ATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGA 95026 | ||| || || |||| | |||| || | |||||||| | ||| |||| Sbjct 621780 CACCTTCAAGGGCTC-CCCTGCTTCCGAGGGTATCCTCCAGTTCGATATGTGGAACGTGA 621722 Query 95027 AGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGA 95086 ||||||| | || | |||||||| |||| | | | || | |||||||| | Sbjct 621721 AGCCCTCCGACCTTTGGGACTGGGAGACTCTCAGAGAGCAGGTCAAGGAACACGGTATCC 621662 Query 95087 AAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACA 95146 ||| |||| | || ||||||||||| ||| || |||||||||| ||||| | Sbjct 621661 GCAACAGTTTGCTCCTTGCACCCATGCCCACTGCCAGTACCTCGCAGATCCTGGGCAATA 621602 Query 95147 ACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAAT 95206 |||||| || || || | ||| |||||| | ||| | | || || || || || || | Sbjct 621601 ACGAGTGCTTTGAGCCTTACACTTCCAACATCTACCAGCGCCGAGTCCTTGCTGGTGAGT 621542 Query 95207 TCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTG---GGGT 95262 ||| ||| | ||| || || ||| || | || | ||||| |||| || | Sbjct 621541 TCCAGGTCGTGAACCCCTGGCTGCTCAAGGATCTCGTCGAC-ATGGGTTTGTGGTCGGAT 621483 Query 95263 GACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATA 95322 | || | ||||||| | | | || ||||||||| ||||||||||||| | || Sbjct 621482 GCCA---TGAAGAACCGAATCATTGCCGAGAACGGCTCCATCCAGAACATCCCAAACATC 621426 Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || | || ||||||| || |||||||| ||||||||||| | |||||| Sbjct 621425 CCTGCCGAAGTCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCACAGCGC 621375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722538307720