Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq20 82.4 5e-11 >seq20 Length=1074596 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || || || |||||||||||| ||| ||| | || || | ||| Sbjct 147063 TGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCATCCTCGAGTTGC 147122 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 |||||||| | |||| |||||||||||| || || || |||||||| ||| ||| Sbjct 147123 TTGCCAGCAAAGATCAGACGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTG 147182 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || ||||| ||| || || || | ||||||||| || || || Sbjct 147183 GACTTGACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTG 147242 Query 15154 AGAGTTTTTACAA 15166 || || || |||| Sbjct 147243 AGGGTCTTGACAA 147255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391533938495