Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq20 100 3e-16 seq2 89.7 5e-13 >seq20 Length=1074596 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || ||||| || || ||||| ||||| || |||||| Sbjct 147667 ATACCACCACGGAGGCGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCG 147726 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | || || || ||| | |||||||| ||||||||||| Sbjct 147727 GCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGG 147786 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || |||| || | || | |||||| || ||||| Sbjct 147787 GGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCCGAGGACTC 147845 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGT 45316 ||| ||||| |||| || ||||| || Sbjct 147846 GACCTCGAGGGTAATGGTCTTGCCCGT 147872 >seq2 Length=1405217 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || || ||||| | ||| ||| || | || || || || | Sbjct 409131 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 409190 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 || | ||| ||||| ||||| |||||||| || || || || || || |||| || | Sbjct 409191 ATGAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTT 409249 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | ||||||||||||||| || || || || | ||| || || || ||||| || || Sbjct 409250 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGAGTCTTGAC 409309 Query 45329 AAAAATTTGCATC 45341 ||||| |||||| Sbjct 409310 GAAAATCTGCATC 409322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002595445720