Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31]
107 sequences; 53,748,257 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq30 149 1e-30
>seq30
Length=762562
Score = 149 bits (164), Expect = 1e-30
Identities = 457/686 (67%), Gaps = 28/686 (4%)
Strand=Plus/Plus
Query 203842 GTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGC-TTCTCAGATAGTACATGCCGG 203900
||| || ||||| ||||| | | | || ||||||| ||| ||| ||||||||||| |
Sbjct 621183 GTCGACAGTGAATTGAATAGGGGCTGCCGC-GGCCTGCGTTCGCAGGTAGTACATGCCAG 621241
Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960
|||| || || || ||| || | ||||||| | | |||| || | ||||||
Sbjct 621242 TCTTGAGACCAAGCTTCCAGCCTGTGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGT 621301
Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCC 204019
| |||||| ||||| || |||||| || || || |||||| || || || || |||
Sbjct 621302 CCTTCATGTGGATGTTGAGGGACTGGGACTGATCAAT-AAAGGCACCTCGGTCGGCAGCC 621360
Query 204020 ATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077
|| | || | ||| ||| |||||||||||||| |||||| ||| | || |
Sbjct 621361 ATCTGGACGACCTGGCG--CTGTGAAATCTCCCACACAGTCTTGTACAGAGCCTTGACTT 621418
Query 204078 GTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136
||| | | || | || ||| || |||||||| ||||| || | || || ||
Sbjct 621419 CGGCAGGGATGT-TTGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATTCGGTTCTTC 621477
Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196
| | ||| ||||| |||| || || ||| | ||| |||||| | || |
Sbjct 621478 ATGGCATCCGACCACAAACCCATGTCGACGAGATCCTTGAGCAGCCAGGGGTTCACGACC 621537
Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256
|| || || || | || || | || | | | |||| ||| | || || || |
Sbjct 621538 TGGAACTCACCAGCAAGGACTCGGCGCTGGTAGATGTTGGAAGTGTAAGGCTCAAAGCAC 621597
Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316
||||| ||||| | ||||| | ||| ||||| ||||||||||| || ||||||| |
Sbjct 621598 TCGTTATTGCCCAGGATCTGCGAGGTACTGGCAGTGGGCATGGGTGCAAGGAGCAAACTG 621657
Query 204317 TTGCGCACACCGTATTTTTGGACCCTGCGCT-TCAGAGAGGTCCAGTCGTGCA--TCGCA 204373
||||| | ||||| || | || ||||| || | |||| |||||| | ||| |
Sbjct 621658 TTGCGGATACCGTGTTCCTTGA-CCTGCTCTCTGAGAGTCTCCCAGTCCCAAAGGTCGGA 621716
Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGA--CTGGGCTGCCCT 204431
||| |||||| |||||| |||||||| | ||| || | | || | ||| |||||
Sbjct 621717 --GGGCTTCACGTTCCACATATCGAACTGGAGGATACCCT--CGGAAGCAGGGGAGCCCT 621772
Query 204432 TGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCA-CGAGGCGGCCA---TGGCG 204487
|| | || | || || ||||| | |||||| |||| |||||| | | |||
Sbjct 621773 TGAAGGTGGAGTAGGGACCTTCCTCCTTAGCCAGC-TGCACCGAGGCAGTGAGAGCAGCG 621831
Query 204488 TGATAGTACATGGTCTCAAAGATCTG 204513
|||||| ||||||||||| |||||
Sbjct 621832 TGATAG---ATGGTCTCAAAAATCTG 621854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154136479920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |