Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq30 248 1e-60 seq35 125 9e-24 >seq30 Length=762562 Score = 248 bits (274), Expect = 1e-60 Identities = 927/1430 (65%), Gaps = 49/1430 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| || | | || ||| || || |||||||| ||| Sbjct 622947 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGTGACGATATTGAGCGTGT 622888 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||||||| || ||||| | | |||| |||||| | || || || || Sbjct 622887 CCTTGAGACATACAACCTCATGTCGAGCAAGTTCTTCACCCACGCCTCCCCCACTCTATT 622828 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| ||||| || || ||||| |||| || ||||| ||| | |||||||| Sbjct 622827 CAATGCTGGCACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGTTGACATGAAGGAGGA 622768 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || || | ||||||| |||||| || || ||| |||||| Sbjct 622767 CAGCATTGAGGGTATCTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGATGGCTGG 622708 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908 ||| || || || || | || || | |||| | | ||| || | | ||||| Sbjct 622707 TGGCATTGGTCTGAACGTGCACCGCATCCGTGCCACC--GGCTCCTACATCGCCGGTACC 622650 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || ||| || | || | | || ||||| || || || ||| ||| || || ||| Sbjct 622649 AACGGTACTTCCAACGGCGTCACCCCCATGCTCCGAGTCTTCAACAACACTGCCCGATAT 622590 Query 111969 GTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGG 112022 || |||| | ||| |||| || || |||| |||| |||||||| ||| Sbjct 622589 GTTGACCAGGGTGGCAA---CAAGCGACCTGGTGCCTTCGCTATCTACCTTGAGCCCTGG 622533 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080 ||| ||||| || | ||||||||||| |||| ||||| || | ||||||| ||| Sbjct 622532 CACTCGGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTTCGC 622473 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | | ||||| || ||| ||||||||||| || ||||||||||||||| | |||||| Sbjct 622472 GCT--CGCGACCTGTTCCTTGCTCTCTGGATCCCCGATCTCTTCATGAAGCGTGTTGAGA 622415 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| ||| | ||| | ||| | || || | || |||||||| |||| | | Sbjct 622414 AGAACGGCGACTGGACCCTCATGTGCCCTAATGAGTGCCCCGGTCTTGCCGACTGCTACG 622355 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GAC 112258 | || |||||||| || || || |||||||| | || | | | | | || ||| Sbjct 622354 GCGATGAGTTTGAGGCTCTGTATGAGAAGTACGA-GCAGGCTGGCAAGGGTC-GCAAGAC 622297 Query 112259 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 | | || | || | | ||| | |||||||| || |||| ||||||||||| | | Sbjct 622296 CAT-CAAGGCTCAGAAGCTCTGGTATGCTATTCTTGAGGCTCAGACCGAGACTGGCAACC 622238 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | | ||||| ||||| ||| ||| |||| |||||||| || ||||| ||||| | Sbjct 622237 CCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGGTACCA 622178 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437 | || |||||| | || || || || | || | | | |||||| |||| Sbjct 622177 TTCGAAGCTCCAACTTGTGCACTGAGATTATTGAGTACTGTGCCCCTGATGAGGTTGCTG 622118 Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATT 112495 |||| ||||| ||||| ||||||| ||| ||| | | | || ||| | | Sbjct 622117 TGTGCAACCTGGCATCCCTCGCTCTGCCCTCGTACATCAA--CTACGATGAAGCCTGCTA 622060 Query 112496 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 ||| | || || || ||| | || || | |||| || || ||||| | || Sbjct 622059 TGACTTCGAGAAGCTGCACAAGGTCACCCAGGTTGTCGTTCGCAATCTCAACAGGATCAT 622000 Query 112556 TGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 |||| || || || || |||| || || || || ||| | ||||| || Sbjct 621999 TGATGTGAACCACTATCCTGTCCCTGAG---GCCCGCAACAGCAACATGCGTCACCGACC 621943 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTG 112671 || ||| | || ||||| ||||| ||||||| ||| || || || ||| | || | Sbjct 621942 TATCGGTGTTGGCGTCCAGGGTCTTGCGGATGCTTTCCTTGCTCTG-CGCATGCCCTTCG 621884 Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731 | || || || || |||| || || |||||||| || |||||||| |||| Sbjct 621883 AGTCTCCTGAGGCTCGTGAGCTCAACAAGCAGATTTTTGAGACCATCTATCACGCTGCTC 621824 Query 112732 T---TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 112788 | || || || | || |||| ||| || ||||| || ||||| |||| | Sbjct 621823 TCACTGCCTCG-GT--GCAGCTGGCTAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCT 621767 Query 112789 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGCTT 112844 | || ||||| | || | || || || ||||||| |||| |||| || | ||| Sbjct 621766 CCCCTGCTTCCGAGGGTATCCTCCAGTTCGATATGT-GGAACGTGAAGCCCTCCGACCTT 621708 Query 112845 CACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 112904 | |||||||| |||||| || | ||||||| | ||| | || |||||| | Sbjct 621707 ---TGGGACTGGGAGACTCTCAGAGAGCAGGTCAAGGAACACGGTATCCGCAACAGTTTG 621651 Query 112905 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 112964 | | ||||| ||||| || ||| ||| | || ||| |||| ||||| || |||||| Sbjct 621650 CTCCTTGCACCCATGCCCACTGCCAGTACCTCGCAGATCCTGGGCAATAACGAGTGCTTT 621591 Query 112965 GAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTT 113014 || || ||||| | |||||||| | | | || ||| || || ||||| Sbjct 621590 GAGCCTTACACTTCCAACATCTACCAGCGCCGAGTCCTTGCTGGTGAGTT 621541 >seq35 Length=674057 Score = 125 bits (138), Expect = 9e-24 Identities = 294/436 (67%), Gaps = 6/436 (1%) Strand=Plus/Plus Query 101899 ACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACT 101958 ||||||| || |||||||||| || ||||| ||||| ||||| || | | | Sbjct 114725 ACATCCTTGCCTTCTTTGCTGCTTCTGATGGCATTGTCAACGAGAACCTCGTTGAGCGGT 114784 Query 101959 TTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAAT 102017 | || ||||| || |||| |||| || ||| ||||||| | || | |||| || Sbjct 114785 TCAGTGGCGAGGTCCAGATCC-CTGAGGCCCGATGCTTCTATGGAT-TCCAGATCATGAT 114842 Query 102018 GAA-ATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGC 102076 | | | | ||| ||||| ||| || || |||| || || ||||| | | Sbjct 114843 GGAGAATATCCATTCTGAGACCTACTCGCTGCTTATCGACACTTACATCAAGGAGCCTTC 114902 Query 102077 TGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGA 102136 | || | | ||||| | || ||| | || | || ||||| | |||||| || || Sbjct 114903 TCAGCGCACCTACCTCTTCAATGCTATCGAGACCATCCCCTGTATCCGAAAGAAGGCCGA 114962 Query 102137 TTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCAT 102195 |||||| || ||| | | |||| | | ||||||||| |||| || | || | Sbjct 114963 TTGGGCCATCCGATGGATCCAGGACAAGAACTC-TTCCTTTGCCCAGCGTCTGGTTGCCT 115021 Query 102196 TTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGA 102255 | || ||| |||||||| |||||| || ||||| | || | |||||||||| Sbjct 115022 TCGCTGCTGTCGAGGGTATTTTCTTCAGCGGCGCCTTCGCTTCCATCTTCTGGCTCAAGA 115081 Query 102256 AGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGAC 102315 |||| ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| | Sbjct 115082 AGCGCGGTCTTATGCCTGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTC 115141 Query 102316 TCCACCAAGAGTTTGC 102331 ||||| || ||||| Sbjct 115142 TCCACACCGACTTTGC 115157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741569757040