Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31]
107 sequences; 53,748,257 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq30 248 1e-60
seq35 125 9e-24
>seq30
Length=762562
Score = 248 bits (274), Expect = 1e-60
Identities = 927/1430 (65%), Gaps = 49/1430 (3%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||| ||| ||||| ||||||| || | | || ||| || || |||||||| |||
Sbjct 622947 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGTGACGATATTGAGCGTGT 622888
Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||||||| || ||||| | | |||| |||||| | || || || ||
Sbjct 622887 CCTTGAGACATACAACCTCATGTCGAGCAAGTTCTTCACCCACGCCTCCCCCACTCTATT 622828
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
||| ||||| || || ||||| |||| || ||||| ||| | ||||||||
Sbjct 622827 CAATGCTGGCACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGTTGACATGAAGGAGGA 622768
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| | || || || | ||||||| |||||| || || ||| ||||||
Sbjct 622767 CAGCATTGAGGGTATCTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGATGGCTGG 622708
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908
||| || || || || | || || | |||| | | ||| || | | |||||
Sbjct 622707 TGGCATTGGTCTGAACGTGCACCGCATCCGTGCCACC--GGCTCCTACATCGCCGGTACC 622650
Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
|| ||| || | || | | || ||||| || || || ||| ||| || || |||
Sbjct 622649 AACGGTACTTCCAACGGCGTCACCCCCATGCTCCGAGTCTTCAACAACACTGCCCGATAT 622590
Query 111969 GTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGG 112022
|| |||| | ||| |||| || || |||| |||| |||||||| |||
Sbjct 622589 GTTGACCAGGGTGGCAA---CAAGCGACCTGGTGCCTTCGCTATCTACCTTGAGCCCTGG 622533
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080
||| ||||| || | ||||||||||| |||| ||||| || | ||||||| |||
Sbjct 622532 CACTCGGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTTCGC 622473
Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140
| | ||||| || ||| ||||||||||| || ||||||||||||||| | ||||||
Sbjct 622472 GCT--CGCGACCTGTTCCTTGCTCTCTGGATCCCCGATCTCTTCATGAAGCGTGTTGAGA 622415
Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200
||| ||| | ||| | ||| | || || | || |||||||| |||| | |
Sbjct 622414 AGAACGGCGACTGGACCCTCATGTGCCCTAATGAGTGCCCCGGTCTTGCCGACTGCTACG 622355
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GAC 112258
| || |||||||| || || || |||||||| | || | | | | | || |||
Sbjct 622354 GCGATGAGTTTGAGGCTCTGTATGAGAAGTACGA-GCAGGCTGGCAAGGGTC-GCAAGAC 622297
Query 112259 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317
| | || | || | | ||| | |||||||| || |||| ||||||||||| | |
Sbjct 622296 CAT-CAAGGCTCAGAAGCTCTGGTATGCTATTCTTGAGGCTCAGACCGAGACTGGCAACC 622238
Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377
| | ||||| ||||| ||| ||| |||| |||||||| || ||||| ||||| |
Sbjct 622237 CCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGGTACCA 622178
Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437
| || |||||| | || || || || | || | | | |||||| ||||
Sbjct 622177 TTCGAAGCTCCAACTTGTGCACTGAGATTATTGAGTACTGTGCCCCTGATGAGGTTGCTG 622118
Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATT 112495
|||| ||||| ||||| ||||||| ||| ||| | | | || ||| | |
Sbjct 622117 TGTGCAACCTGGCATCCCTCGCTCTGCCCTCGTACATCAA--CTACGATGAAGCCTGCTA 622060
Query 112496 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555
||| | || || || ||| | || || | |||| || || ||||| | ||
Sbjct 622059 TGACTTCGAGAAGCTGCACAAGGTCACCCAGGTTGTCGTTCGCAATCTCAACAGGATCAT 622000
Query 112556 TGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612
|||| || || || || |||| || || || || ||| | ||||| ||
Sbjct 621999 TGATGTGAACCACTATCCTGTCCCTGAG---GCCCGCAACAGCAACATGCGTCACCGACC 621943
Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTG 112671
|| ||| | || ||||| ||||| ||||||| ||| || || || ||| | || |
Sbjct 621942 TATCGGTGTTGGCGTCCAGGGTCTTGCGGATGCTTTCCTTGCTCTG-CGCATGCCCTTCG 621884
Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731
| || || || || |||| || || |||||||| || |||||||| ||||
Sbjct 621883 AGTCTCCTGAGGCTCGTGAGCTCAACAAGCAGATTTTTGAGACCATCTATCACGCTGCTC 621824
Query 112732 T---TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 112788
| || || || | || |||| ||| || ||||| || ||||| |||| |
Sbjct 621823 TCACTGCCTCG-GT--GCAGCTGGCTAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCT 621767
Query 112789 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGCTT 112844
| || ||||| | || | || || || ||||||| |||| |||| || | |||
Sbjct 621766 CCCCTGCTTCCGAGGGTATCCTCCAGTTCGATATGT-GGAACGTGAAGCCCTCCGACCTT 621708
Query 112845 CACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 112904
| |||||||| |||||| || | ||||||| | ||| | || |||||| |
Sbjct 621707 ---TGGGACTGGGAGACTCTCAGAGAGCAGGTCAAGGAACACGGTATCCGCAACAGTTTG 621651
Query 112905 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 112964
| | ||||| ||||| || ||| ||| | || ||| |||| ||||| || ||||||
Sbjct 621650 CTCCTTGCACCCATGCCCACTGCCAGTACCTCGCAGATCCTGGGCAATAACGAGTGCTTT 621591
Query 112965 GAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTT 113014
|| || ||||| | |||||||| | | | || ||| || || |||||
Sbjct 621590 GAGCCTTACACTTCCAACATCTACCAGCGCCGAGTCCTTGCTGGTGAGTT 621541
>seq35
Length=674057
Score = 125 bits (138), Expect = 9e-24
Identities = 294/436 (67%), Gaps = 6/436 (1%)
Strand=Plus/Plus
Query 101899 ACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACT 101958
||||||| || |||||||||| || ||||| ||||| ||||| || | | |
Sbjct 114725 ACATCCTTGCCTTCTTTGCTGCTTCTGATGGCATTGTCAACGAGAACCTCGTTGAGCGGT 114784
Query 101959 TTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAAT 102017
| || ||||| || |||| |||| || ||| ||||||| | || | |||| ||
Sbjct 114785 TCAGTGGCGAGGTCCAGATCC-CTGAGGCCCGATGCTTCTATGGAT-TCCAGATCATGAT 114842
Query 102018 GAA-ATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGC 102076
| | | | ||| ||||| ||| || || |||| || || ||||| | |
Sbjct 114843 GGAGAATATCCATTCTGAGACCTACTCGCTGCTTATCGACACTTACATCAAGGAGCCTTC 114902
Query 102077 TGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGA 102136
| || | | ||||| | || ||| | || | || ||||| | |||||| || ||
Sbjct 114903 TCAGCGCACCTACCTCTTCAATGCTATCGAGACCATCCCCTGTATCCGAAAGAAGGCCGA 114962
Query 102137 TTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCAT 102195
|||||| || ||| | | |||| | | ||||||||| |||| || | || |
Sbjct 114963 TTGGGCCATCCGATGGATCCAGGACAAGAACTC-TTCCTTTGCCCAGCGTCTGGTTGCCT 115021
Query 102196 TTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGA 102255
| || ||| |||||||| |||||| || ||||| | || | ||||||||||
Sbjct 115022 TCGCTGCTGTCGAGGGTATTTTCTTCAGCGGCGCCTTCGCTTCCATCTTCTGGCTCAAGA 115081
Query 102256 AGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGAC 102315
|||| ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| |
Sbjct 115082 AGCGCGGTCTTATGCCTGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTC 115141
Query 102316 TCCACCAAGAGTTTGC 102331
||||| || |||||
Sbjct 115142 TCCACACCGACTTTGC 115157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741569757040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |