Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq30 221 1e-52 seq76 96.9 4e-15 >seq30 Length=762562 Score = 221 bits (244), Expect = 1e-52 Identities = 1016/1592 (64%), Gaps = 51/1592 (3%) Strand=Plus/Plus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 ||||| |||||||| || || ||| || || || ||||| | || || | | | Sbjct 621322 GACTGGGACTGATCAATAAAGGCACCTCGGTCGGCAGCCATCTGGACGA----CCTGGCG 621377 Query 109567 CT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGAT 109622 || ||| ||||| ||||||||||||| | ||||| || | || |||| ||| Sbjct 621378 CTGTGAAATCTCCCACACAGTCTTGTACAGAGCCTTGACTTCGGCAGGGATGTTTGGGAT 621437 Query 109623 GTTTTGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAGAG 109679 ||| || || ||||| || | |||| | | |||||| | | |||||| | Sbjct 621438 GTTCTGGATGGAGCCGTT---CTCGGCAATGATTCGGTTCTTCATGGCATCCGACCACAA 621494 Query 109680 ACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAG 109739 ||| | | |||||| | | || ||| || || || ||||||||||| Sbjct 621495 ACCCATGTCGACGAGATCCTTGAGCAGCCAGGGGTTCACGACCTGGAACTCACCAGCAAG 621554 Query 109740 TGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGAT 109799 || || |||||||||| | ||||| || || || ||||| || ||||| ||||| Sbjct 621555 GACTCGGCGCTGGTAGATGTTGGAAGTGTAAGGCTCAAAGCACTCGTTATTGCCCAGGAT 621614 Query 109800 TTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGT 109859 || | || || ||||||||||| || | ||| | |||||| |||| ||| | Sbjct 621615 CTGCGAGGTACTGGCAGTGGGCATGGGTGCAAGGAGCAAACTGTTGCGGATACCGTGTTC 621674 Query 109860 CTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATC 109919 ||| ||| |||| | | | ||||| || || | | || ||| || Sbjct 621675 CTTGACCTGCTCTCTGAGAGTCTCCCAGTCCCAAAGGTCGGAGGGCTT-----CACGTTC 621729 Query 109920 CCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGA 109979 | ||||||| || || | |||||| | |||||| || |||||||| | ||| | Sbjct 621730 C-ACATATCGAACTGGAGGATACCCTCGGAAGCAGGGGAGCCCTTGAAGGTGGAGTAGGG 621788 Query 109980 CCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAA 110039 || || ||| |||| || || || || || || ||||| || |||||||| Sbjct 621789 ACCTTCCTCCTTAGCCAGCTGCACCGAGGCAGTGAGAGCAGCGTGATAGATGGTCTCAAA 621848 Query 110040 AATATGAGCATTCATGAGG---CGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AA 110095 ||| || || |||| |||| ||| | | |||||||| | | || || || Sbjct 621849 AATCTGC---TTGTTGAGCTCACGAGCCTCAGGAGACTCGAAGGGCATGCG-CAGAGCAA 621904 Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155 || ||||||| |||||||| || || | ||| || || || || |||||| | Sbjct 621905 GGAAAGCATCCGCAAGACCCTGGACGCCAACACCGATAGGTCGGTGACGCATGTTGCTGT 621964 Query 110156 GTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCA 110215 || || || || || ||| || |||| || |||||||| | Sbjct 621965 TGCGGGCCTCAGGGACAGGATAGTGGTTCACATCAATGATCCTGTTGAGATTGCGAACGA 622024 Query 110216 CAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACA 110274 || || |||| | || || || ||| | || | | | || | || |||| Sbjct 622025 CAACCTGGGTGACCTTGTGCAGCTTCTCGAAGTCATA-GCAGGCTTCATCGTAGTTGATG 622083 Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334 || ||| ||||| | || || || |||||||||| | ||| || | | ||| Sbjct 622084 TACGAGGGCAGAGCGAGGGATGCCAGGTTGCACACAGCAACCTCATCAGGGGCACAGTAC 622143 Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGAT 110394 || | ||| || || ||||||||||| || |||| ||||| ||||||||| || Sbjct 622144 TCAATAATCTCAGTGCACAAGTTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTACTC 622203 Query 110395 TTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG 110454 ||| |||||| ||||| ||||||||| | ||| | ||||| || ||||| | || Sbjct 622204 TTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCA 622263 Query 110455 AGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCC 110511 ||||| || | ||| | | || | | | | | || |||| | | || ||| | Sbjct 622264 AGAATAGCATACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCG--ACCCTTGCCAGCCTGC 622320 Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571 |||||||| |||| ||||||| || | ||||| || | |||||| | Sbjct 622321 TCGTACTTCTCATACAGAGCCTCAAACTCATCGCCGTAGCAGTCGGCAAGACCGGGGCAC 622380 Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 | | || || | ||||| ||| | || || |||||| | ||||||||| || || Sbjct 622381 TCATTAGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCG 622440 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691 || ||||| | || ||| ||||| || ||| |||| || | || ||||| | Sbjct 622441 GGGATCCAGAGAGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTG 622500 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 || || || | || || | || |||||||||||| || || || |||| ||||| || Sbjct 622501 CGCAGGTCAAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATAGCGAAGGCA 622560 Query 110752 CCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805 || | | || || |||||| |||||| || || ||| |||||||| | | Sbjct 622561 CC---AGGTCGCTTGTTGCCACCCTGGTCAACATATCGGGCAGTGTTGTTGAAGACTCGG 622617 Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865 ||||| || | | || | ||| ||| || ||||| || ||| ||||| Sbjct 622618 AGCATGGGGGTGACGCCGTTGGAAGTACCGTTGGTACCGGCGATGTAGGAGCCGGTGGCA 622677 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTC 110924 || ||| ||| | | || |||||| ||||| ||| ||| ||| ||||| || Sbjct 622678 CGGATGCGGTGCACGTTCAGACCAATGCCACCAGCCATCTTGGAAATCATGGCACAGGTC 622737 Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | |||| ||| |||| ||||| ||||| || |||| || ||| || ||||| || Sbjct 622738 T-TGAGAGTATCATAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAGGAAGCATGA 622796 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 ||||| ||| || |||| || || |||||||| || || || | || || ||| || Sbjct 622797 AGACAGCTGGGGCTGAGGAGTGCCAGCATTGAATAGAGTGGGGGAGGCGTGGGTGA--AG 622854 Query 111045 ACCTTG--GGACATCTTGTTGTATGTGTCGAG 111074 | |||| ||||| ||||||||| || || Sbjct 622855 AACTTGCTCGACATGAGGTTGTATGTCTCAAG 622886 >seq76 Length=1762342 Score = 96.9 bits (106), Expect = 4e-15 Identities = 311/467 (67%), Gaps = 28/467 (6%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||| || || || || | ||||| | ||||| || || | ||||| || | Sbjct 861034 CGATCGAATCGTCCAGGTCGCATCAGAGCCTTGTCAAGCATGTCTGCTCGGTTGGTGCCA 861093 Query 11563 GCAATGACTACAATGCCAGTCTC--ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 || | || || | || || | | ||| ||| || ||||| || ||||| | |||| Sbjct 861094 GCCAGAACCACGA--CCTGTTCCCGAGTGTTGAAGCCATCCATCTCAGTGAGGATTTGGT 861151 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCT--TACC 11678 ||| || || |||||||||||| | ||| | |||| | | | | | || Sbjct 861152 TGAGGGTAGCCTCCCGCTCATCGTTGCCACCGAAACCTCG-GCCGCTCTCCTGTCGTGCC 861210 Query 11679 --GACA---GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 | || || || || |||||||| || | ||| || ||| ||| || |||| Sbjct 861211 CGGCCAATGGCATCGATTTCATCGATAAAGATGATGCAGGGTGCGTTCTTGCG-GCCT-- 861267 Query 11734 TCG---AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 ||| || || || | ||||| | ||||| || || |||||||||||||| || Sbjct 861268 TCGGCAAACAGGTCTCTCACACGAGAAGGGCCAACGCCCACAAACATCTCAACGAA-TTC 861326 Query 11791 GCGGCAGAACAC--TGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGA 11848 | || | ||| |||| |||||||||| || || ||||| | ||| || || | Sbjct 861327 GGAGCCGCTCACGCTGAA-GAAGGGAACACCCGATTCGCCAGCTGTAGCTTTGGCAAGTA 861385 Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA- 11907 |||||||| ||||| || | ||| || |||| ||||| |||||||||||||| ||| Sbjct 861386 ATGTCTTACCGGTACCGGGAGGACCGGCCAGAATTGCGCCTCGGGGGATCTTGGCTCCAA 861445 Query 11908 -CTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 ||| |||| | ||| |||| ||| |||||| |||| |||| Sbjct 861446 GTTTCTCAAACT---TCTCGGGCTGCTTCAGGAAGCTTACAAACTCC 861489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975212244600