Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq30 230 3e-55 >seq30 Length=762562 Score = 230 bits (254), Expect = 3e-55 Identities = 918/1420 (65%), Gaps = 45/1420 (3%) Strand=Plus/Plus Query 105908 AACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCA 105967 ||||| || || ||| || | | | |||||||| | ||||| || |||||||| || Sbjct 621541 AACTCACCAGCAAGGACTCGGCGCTGGTAGATGTTGGAAGTGTAAGGCTCAAAGCACTCG 621600 Query 105968 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 106027 ||||| |||| ||| || | ||| ||| || ||||| ||||| | | | |||||| Sbjct 621601 TTATTGCCCAGGATCTGCGAGGTACTGGCAGTGGGCATGGGTGCAAGGAGCAAACTGTTG 621660 Query 106028 CGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA---GTTG-AGCTT 106083 || | ||| | |||||||| | || ||||| |||||||| | || | || Sbjct 621661 CGGATACCGTGTTCCTTGACCTGCTCTCTGAGAGTCTCCCAGTCCCAAAGGTCGGAG--- 621717 Query 106084 GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAA 106143 || ||||| |||| ||||||| || || || | || | ||| | || || |||| || Sbjct 621718 GGCTTCACGTTCC-ACATATCGAACTGGAGGATACCCTCGGAAGCAGGGGAGCCCTTGAA 621776 Query 106144 TGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGAT 106202 || |||| ||||| | | ||||| | ||| | || || | ||||||| Sbjct 621777 GGTGGAGTAGGGACCTTCCTCCTTAGCCAGCTGCACCGAG-GCAGTGAGAGCAGCGTGAT 621835 Query 106203 ACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGC 106262 | ||||| ||||| || | || | ||| || ||| || || || | || Sbjct 621836 AGATGGTCTCAAAAATCTGCTTGTTGAGCTCACGAGCCTCAGGAGACTCGAAGGGCATGC 621895 Query 106263 GGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 106321 | || | || || ||||||| ||||| || || || | ||| ||||||| ||| ||| Sbjct 621896 G-CAGAGCAAGGAAAGCATCCGCAAGACCCTGGACGCCAACACCGATAGGTCGGTGACGC 621954 Query 106322 ATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTT 106378 || || || || || |||| || ||||| || ||||||| | ||| Sbjct 621955 ATGTTGCTGTTGCGGGC---CTCAGGGACAGGATAGTGGTTCACATCAATGATCCTGTTG 622011 Query 106379 AGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTC 106438 ||||| |||| || |||| | || || || || | ||| | | | || Sbjct 622012 AGATTGCGAACGACAACCTGGGTGACCTTGTGCAGCTTCTCGAAGTCATAGCAG-GCTTC 622070 Query 106439 -TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497 || | |||| ||| || || |||| ||||||| ||||| ||||| |||||| Sbjct 622071 ATCGTAGTTGATGTACGAGGGCAGAGCGAGGGATGCCAGGTTGCACACAGCAACCTCATC 622130 Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557 | |||||| | ||| || || ||||||||||| || ||| || |||| || Sbjct 622131 AGGGGCACAGTACTCAATAATCTCAGTGCACAAGTTGGAGCTTCGAATGGTACCCAGGTT 622190 Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||| ||||||||||| |||||| ||||||||||||||| |||| | || ||||| Sbjct 622191 CTTCTGGTTACTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCAGTCTC 622250 Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-GCC 106675 ||||| | || ||||| || | ||| | | || | | || | |||| ||| | | Sbjct 622251 GGTCTGAGCCTCAAGAATAGCATACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGAC 622306 Query 106676 CGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGG 106733 | | || || ||||||||| || || || |||||||| || || ||||| Sbjct 622307 CCTTGCCAGCCTGCTCGTACTTCTCATACAGAGCCTCAAACTCATCGCCGTAGCAGTCGG 622366 Query 106734 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCT 106793 ||||| || || | || || | || | ||| | || || |||||| |||| Sbjct 622367 CAAGACCGGGGCACTCATTAGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCT 622426 Query 106794 TCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGT 106853 ||||||| || || || ||||| || | || || || | | ||| |||| || | Sbjct 622427 TCATGAAGAGATCGGGGATCCAGAGAGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCT 622486 Query 106854 CACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGAT 106913 || ||||| || | ||||||||||| | || ||||| |||||| |||||||| | Sbjct 622487 TGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGT 622546 Query 106914 AGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGG 106967 ||| |||| || || ||| | | ||| | || | ||||| || || ||| Sbjct 622547 AGATAGCGAAGGCACCAGGTCGCTT--GTTG-CCACCCTGGTCAACATATCGGGCAGTGT 622603 Query 106968 CGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-AT 107025 ||| || || || ||||| || | | || | || ||| || || || ||| | Sbjct 622604 TGTTGAAGACTCGGAGCATGGGGGTGACGCCGTTGGAAGTACCGTTGGTACCGGCGATGT 622663 Query 107026 ACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGA 107085 | ||| |||| | | || | || || ||||| || |||||| ||| || Sbjct 622664 AGGAG--CCGGTGGCACGGATGCGGTGCACGTTCAGACCAATGCCACCAGCCATCTTGGA 622721 Query 107086 GATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGC 107145 || ||||| | | ||||| |||||||||| | || ||||||||| || | Sbjct 622722 AATCATGGCACAGGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCCTCCTTCATGTC 622781 Query 107146 GATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGT 107205 | |||||||| |||| ||| || || || ||||||||||| || || || | Sbjct 622782 AACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGTGCCAGCATTGAATAGAGTGGGGGA 622841 Query 107206 TGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATG 107263 ||||| ||| | | |||| ||||| || ||||||||| | |||| ||||| Sbjct 622842 GGCGTGGGTGA--AGAACTTGCTCGACATGAGGTTGTATGTCTCAAGGACACGCTCAATA 622899 Query 107264 TCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || || || |||||| | | ||||||||| | ||||| Sbjct 622900 TCGTCACCCCAGATGCCAACAGACACACGCATGATCATGT 622939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980010900680