Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq20 87.8 1e-11 >seq20 Length=1074596 Score = 87.8 bits (96), Expect = 1e-11 Identities = 155/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCT-AGAGTTCT 563315 || || || || || || || ||| ||| || ||| ||||| || ||| ||||||| Sbjct 146820 AGTCGCAGGACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTC-GCTGAGAGTTCG 146878 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | || ||||| ||||||||||| || ||||||| |||||||| || ||||| || || Sbjct 146879 TCCGTCCTCAAGCTGTTTTCCGGCGAAGATAAGTCGCTGCTGATCCGGGGGAATGCCCTC 146938 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAG 563434 || || || || || ||||| ||||| ||||| | || ||| ||||| | Sbjct 146939 CTTGTCCTGGATCTTCGACTTTACATTGTCAATAGTATCGGATGACTCTAC-CTCGAGGG 146997 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || || || ||||| || || || || |||||| Sbjct 146998 TGATGGTCTTTCCCGTGAGAGTCTTGACAAAGATCTGCATA 147038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029290341357430