Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq20 105 5e-18 seq2 98.7 8e-16 seq87 95.1 9e-15 >seq20 Length=1074596 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||| ||||| || ||| |||| |||| || | ||| || ||||| || Sbjct 146847 TCCTTCTGAATGTTGTAGTCGCTGAGAGTTCGTCCGTCCTCAAGCTGTTTTCCGGCGAAG 146906 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || |||||||| ||||||| ||||| |||||||||||| ||||| |||||| Sbjct 146907 ATAAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTTACATTG 146966 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | ||| ||||| | || || || |||||||| | ||| || ||| Sbjct 146967 TCAATAGTATCGGATGACTCTACCTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTGACA 147026 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 147027 AAGATCTGCAT 147037 >seq2 Length=1405217 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || || ||||| || || | || | || || | |||| Sbjct 409119 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGC 409178 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| || |||||||| ||||||| ||||| |||||||||||| ||||| Sbjct 409179 TTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 409238 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | || || | ||||||||| | || ||||| || ||||| Sbjct 409239 GACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTG 409298 Query 48744 AAAGTTTTTACAAAAATCTGCATCGTG 48770 | ||| || || |||||||||||| || Sbjct 409299 AGAGTCTTGACGAAAATCTGCATCTTG 409325 >seq87 Length=1518211 Score = 95.1 bits (104), Expect = 9e-15 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 9124 AAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCG 9183 || || | ||||| || |||||||||| || || | |||| ||| || ||||| Sbjct 561259 AAATCCGAGTCGGCGTGGTTGAACAGCAGGACCTTGACTTGGCCCCGGTAGTCGGCATCG 561318 Query 9184 ATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAGAGCGGGGCGCGATT 9243 || |||||||| ||| |||||||||||||||| ||| |||||||| ||||| ||||| Sbjct 561319 ATGACACCAGCGCCCGTGTCGATGAAGTGCTTGGACGCAAGTCCAGATCGGGGAGCGATG 561378 Query 9244 CGACCGT 9250 || |||| Sbjct 561379 CGGCCGT 561385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937103233561