Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq30 221 2e-52 seq35 183 6e-41 >seq30 Length=762562 Score = 221 bits (244), Expect = 2e-52 Identities = 836/1286 (65%), Gaps = 63/1286 (5%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || || |||||||| |||||||||||||| ||| ||||||||| ||| | ||||| || Sbjct 621820 GTGAGAGCAGCGTGATAGATGGTCTCAAAAATCTGCTTGTTGAG-CTCACGAGCCTCAGG 621878 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 ||| ||||||||| ||||| | | ||||| | || || || ||||| || || | | Sbjct 621879 AGACTCGAAGGGCATGCGCAG-AGCAAGGAAAG-CATCCGCAAGACCCTGGACGCCAACA 621936 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 ||||| || | ||| | | ||||| | |||| || || || || ||||| ||| | Sbjct 621937 CCGATAGGTCGGTGACGCATGTTGCTGTTGCGG--GCCTCAGGGACAGGATAGTGGTTCA 621994 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | || || | ||||||| || || || | |||| ||| | ||| || Sbjct 621995 CATCAATGATCCTGTTGAGATTGCGAACGA---------CAACCTGGGTGACCTTGTGCA 622045 Query 221652 GATTGAACACCAACTC---GCCGCCGTCGTGG-AGGGGTTCCACAAAAGCGTTTAGGGCA 221707 | || | | || || || | | || | | || | | || | || || || Sbjct 622046 GCTT---CTCGAAGTCATAGCAGGCTTCATCGTAGTTGATGTACGAGGGC----AGAGCG 622098 Query 221708 ACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTA 221767 | | |||||||| ||||| || ||||| || | |||| || ||||| || Sbjct 622099 AGGGATGCCAGGTTGCACACAGCAACCTCATCAGGGGCACAGTACTCAATAATCTCAGTG 622158 Query 221768 CAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG 221827 || | |||| || ||||| ||||||| || || ||| |||||| ||| ||| | Sbjct 622159 CACAAGTTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTACTCTTGCGGTTG-CAGTG 622217 Query 221828 -TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCA 221886 |||||||||||||| ||||| ||||||||| ||||||| | ||||| | ||| Sbjct 622218 GTCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCAAGAATAGCATACCA 622277 Query 221887 GAGTTCTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACC 221939 ||| | |||| || | | ||| | |||| | || |||| ||| |||||| Sbjct 622278 GAGCT-TCTGAGCCTTGATGGTCTTGCGACCCTTGCCAGCCTGCTCGTACTTCTCATAC- 622335 Query 221940 CGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGG 221999 ||||| | |||||| || ||||| ||| | || || || ||| | Sbjct 622336 ------AGAGCCT--CAAACTCATCGCCGTAGCAGTCGGCAAGACCGGGGCACTCATTAG 622387 Query 222000 GACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCC 222059 | ||||| || |||||| ||| | | || | || ||||||||| || ||||||| Sbjct 622388 GGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGGATCC 622447 Query 222060 ACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGAT 222119 | || || | || || || | | || ||||||| ||||| ||| || | ||| | Sbjct 622448 AGAGAGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 622507 Query 222120 CCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTC 222179 | | |||||||| | || | |||||| ||||| || |||| || | || || |||| Sbjct 622508 CAAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATAGCGAAGGCACCAGGTC 622567 Query 222180 GCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGT 222238 |||||||||||||||| | || ||| ||| | |||||||| || || | || Sbjct 622568 GCTTGTTGCCACCCTGGT-CAACATATCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGG 622626 Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTA 222298 | |||||||| ||||||||| || ||||| | ||| ||| | || | Sbjct 622627 GTGACGCCGTTGGAAGTACCGTTGGTACCGGCGATGTAGGAGCCGGTGGCAC---GGATG 622683 Query 222299 CTG-GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355 | | ||| || || || ||||| || || || |||||||| ||| |||||||| Sbjct 622684 CGGTGCACGTTCAGACCAATGCCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGA 622743 Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415 || || ||| ||||| || ||||||||| | || | ||| || || || |||| | Sbjct 622744 GTATCATAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAGGAAGCATGAAGACAGC 622803 Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475 || | | | | | || || || || ||||| |||||| || ||| | || Sbjct 622804 TGGGGCTGAGGAGTGCCAGCATTGAATAGAGTGGGGGAGGCGTGGGTGAAGAACTTGCTC 622863 Query 222476 GACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGC 222534 ||||| || | ||| ||||| | ||| | | || | ||| ||| || | | | Sbjct 622864 GACATGAGGTTGTATGTCTCAAGGACACGCTCAATATCGTCACCCCAGATGCCAACAGAC 622923 Query 222535 GCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGC--TGGAGAGCAGG 222592 || | |||| ||||| ||| || | ||| ||| | | | | | | ||| ||| Sbjct 622924 ACA-CGCATGATCATGTGCTGAGGGCGCTCGACA--ATCTTGTTATCAATCTTGAGGAGG 622980 Query 222593 TACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACC 222652 || ||| |||||||||||||| |||||||| | | | ||||| | | | | || Sbjct 622981 TATGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGGTATTGGAAGTCACGGTCATAGACA 623040 Query 222653 ACGGCGGCGTCCAGCTCCGACTTGTG 222678 | ||| | |||||||||| |||||| Sbjct 623041 ATGGCAGAGTCCAGCTCCTCCTTGTG 623066 Score = 104 bits (114), Expect = 4e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 |||||| || ||||| || || | || || | | |||||| | ||| |||||| | || Sbjct 621528 GTTCACGACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAGATGTTGGAAGTGTAAGG 621587 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 || | || |||||| |||||||||||||| | || ||||| |||||||||||||| | Sbjct 621588 CTCAAAGCACTCGTTATTGCCCAGGATCTGCGAGGTACTGGCAGTGGGCATGGGTGCAAG 621647 Query 221236 CAGCAGACTGTTGCG 221250 |||| ||||||||| Sbjct 621648 GAGCAAACTGTTGCG 621662 >seq35 Length=674057 Score = 183 bits (202), Expect = 6e-41 Identities = 387/571 (68%), Gaps = 11/571 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| |||||||||||| |||||||| ||| Sbjct 114604 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGATTGACCTG 114663 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 | ||||| | | | ||| || || ||| | ||||||||| ||| || Sbjct 114664 TCTAAGGATCTTCATGATTGGAACAACCGC-CTAACTGCCGACGAGCAGTTCTTTGTCTC 114722 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | | || |||||||| || |||||||| || || |||||||| || ||| | Sbjct 114723 TCACATCCTTGCCTTCTTTGCTGCTTCTGATGGCATTGTCAACGAGAACCTCGTTGAGCG 114782 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 |||| | || || ||| | |||||| || ||||| || |||||||| || Sbjct 114783 GTTCAGTGGCGAGGTCCAGATCCCTGAGGCCCGATGCTTCTATGGATTCCAGATCATGAT 114842 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGA--CGTC 25770 || ||| | || |||||| || | |||| | || ||||| | || | || Sbjct 114843 GGAGAATATCCATTCTGAGACCTACTCGCTGCTTATCGACACTTACATCAAGGAGCCTTC 114902 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 | | | | || || ||| |||||| ||| ||| | ||| | |||||| Sbjct 114903 TCAGCGCACCTAC--CTCTTCAATGCTATCGAGACCATCCCCTGTATCCGAAAGAAGGCC 114960 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 |||||||| |||||| | | ||| | || | |||| | |||| ||||| ||| Sbjct 114961 GATTGGGCCATCCGATGGATCCAGGACAAGAACTCTTCCTTTGCCCAGCGTCTGGTTGCC 115020 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 || |||||||| ||||| || || |||||||| | || || ||||||||||||||||| Sbjct 115021 TTCGCTGCTGTCGAGGGTATTTTCTTCAGCGGCGCCTTCGCTTCCATCTTCTGGCTCAAG 115080 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGG 26009 || || ||||| || ||| ||||| || |||||||||||| | |||||||| Sbjct 115081 AAGCGCGGTCTTATGCCTGGTCTG-ACTTTCTCTAACGAGCTCATCTCTCGTGACGAGGG 115139 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 |||||||| || ||||| ||||| ||| || Sbjct 115140 TCTCCACACCGACTTTGCTTGCCTCCTCCAC 115170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843557670080