Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq21 125 8e-24 >seq21 Length=2398169 Score = 125 bits (138), Expect = 8e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 139284 GCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCT 139343 || ||||| |||||||||| |||||||| || || || ||||||||||| ||||| || Sbjct 769691 GCGTAGAAGGCAGACATATTGGCGAGCAGGGCCTGGGCGGTGCAGATGTTGCTGGTGGCC 769750 Query 139344 TTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCT 139403 || |||| || || |||||||| | || || || || | | || || ||||| Sbjct 769751 TTCTCTCGTCGGATGTGCTGCTCACGGGTCTGGAGAGCAAGACGCAGGGCGGGCTTGCCA 769810 Query 139404 TCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTT 139463 | |||| || ||| |||| | ||||| ||||| | ||| ||||| || | Sbjct 769811 AGTCGGTCCTTGGAGACACCAACAAGACGACCAGGGATCTTGCGCTTGTACTTCTCCGAG 769870 Query 139464 GTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCAA 139512 || |||||||| || ||||||||||| ||||| |||| |||| ||||| Sbjct 769871 GTAGCAAAGAAGGCGGCATGAGGACCACCGTAACCCAGGGGAACACCAA 769919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997625589640