Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq30 185 1e-41 >seq30 Length=762562 Score = 185 bits (204), Expect = 1e-41 Identities = 914/1429 (64%), Gaps = 47/1429 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| || | | |||||| || || || ||||| ||| Sbjct 622947 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGTGACGATATTGAGCGTGT 622888 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 | | ||||||||| || ||||| |||| | | ||| ||||| | || || || Sbjct 622887 CCTTGAGACATACAACCTCATGTCGAGCAAGTTCT--TCACCCACGCCTCCCCCACTCTA 622830 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||||||||||| || || || ||| |||| |||||||| | | || |||||| Sbjct 622829 TTCAATGCTGGCACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGTTGACATGAAGGAG 622770 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | |||||||||| ||||| | | ||||| || || ||| |||| Sbjct 622769 GACAGCATTGAGGGTATCTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGATGGCT 622710 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA-TTCG-GGGGA 75506 || || ||||| || || | || | | |||| ||| || ||| || | Sbjct 622709 GGTGGCATTGGTCTGAACGTGCACCGCATCCGTGCCA--CCGGCTCCTACATCGCCGGTA 622652 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || ||| || | || | | || ||||| || || || ||| ||| || || | Sbjct 622651 CCAACGGTACTTCCAACGGCGTCACCCCCATGCTCCGAGTCTTCAACAACACTGCCCGAT 622592 Query 75567 ATGTAAATCAAGCGGGGCGTC--GCAA--GGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 |||| | | || | ||| | || | || || |||| ||||| | || || ||| Sbjct 622591 ATGTTGA-CCAGGGTGGCAACAAGCGACCTGGTGCCTTCGCTATCTACCTTGAGCCCTGG 622533 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || | ||| || | ||||||||||| | || ||||| || | || |||| ||| Sbjct 622532 CACTCGGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTTCGC 622473 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | || || || | || ||||| || || || ||||||||||| |||||| || Sbjct 622472 GCTCGCGACCTGTTCCTTGCTCTCTGGATCCCCGATCTCTTCATGAAGCGTGTTGAGAAG 622413 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 || | ||| | || | || || | || || ||||| ||||| || Sbjct 622412 AACGGCGACTGGACCCTCATGTGCCCTAATGAGTGCCCCGGTCTTGCCGACTGCTACGGC 622353 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG------AGGGTAGAGCCAATGCG 75856 || |||||||| || || || ||||| || ||| ||||| | ||| | Sbjct 622352 GATGAGTTTGAGGCTCTGTATGAGAAGTACGAGCAGGCTGGCAAGGGTCG---CAA---G 622299 Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 || | | || | | || | | ||| | |||||||| | | ||||| |||||||| | Sbjct 622298 ACCAT-CAAGGCTCAGAAGCTCTGGTATGCTATTCTTGAGGCTCAGACCGAGACTGGCAA 622240 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || | ||||| |||||||| || ||| ||||||||||| ||||| |||| || Sbjct 622239 CCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGGTAC 622180 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 || ||||| || | ||||| || ||| | |||||| | |||||| || Sbjct 622179 CATTCGAAGCTCCAACTTGTGCACTGAGATTATTGAGTACTGTGCCCCTGATGAGGTTGC 622120 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA-GACTCGCACTT 76094 ||| ||||| ||||||| |||| || || ||| |||| | || || | | | Sbjct 622119 TGTGTGCAACCTGGCATCCCTCGCTCTGCCCTCGTACATCAACTACGATGAAGC-CTGCT 622061 Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 ||| | || || || || | |||| || |||| ||||| ||| | ||| Sbjct 622060 ATGACTTCGAGAAGCTGCACAAGGTCACCCAGGTTGTCGTTCGCAATCTCAACAGGATCA 622001 Query 76155 TTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 |||| || ||||| || |||| || || || || ||||| ||| ||| Sbjct 622000 TTGATGTGAACCACTATCCTGTCCCTGAG---GCCCGCAACAGCAACATGCGTCACCGAC 621944 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTT 76270 |||| ||| | || || || ||||| ||||||| || || | || ||| | || Sbjct 621943 CTATCGGTGTTGGCGTCCAGGGTCTTGCGGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 621885 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || || ||| || ||| | || | || ||||| ||||| |||||||| | Sbjct 621884 GAGTCTCCTGAGGCTCGTGAGCTCAACAAGCAGATTTTTGAGACCATCTATCACGCTGCT 621825 Query 76331 CT-GGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 || | | | || | ||||| | | ||||| |||| || || |||| || Sbjct 621824 CTCACTGCCTCGGTG-CAGCTGGCTAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTC 621766 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT-CAAC- 76447 || || ||| | || | || ||||| ||||||| |||| ||||| || || | || Sbjct 621765 CCCTGCTTCCGAGGGTATCCTCCAGTTCGATATGT-GGAACGTGAAGCC---CTCCGACC 621710 Query 76448 --TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | |||||||| ||||| || | ||||||| | ||| | || |||||| | Sbjct 621709 TTTGGGACTGGGAGACTCTCAGAGAGCAGGTCAAGGAACACGGTATCCGCAACAGTTTGC 621650 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 | | ||||| ||||| || ||| ||| | || ||| |||| ||||| || ||||||| Sbjct 621649 TCCTTGCACCCATGCCCACTGCCAGTACCTCGCAGATCCTGGGCAATAACGAGTGCTTTG 621590 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTT 76614 | || ||||| | |||||||||| | | || ||| || |||||||| Sbjct 621589 AGCCTTACACTTCCAACATCTACCAGCGCCGAGTCCTTGCTGGTGAGTT 621541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568802088160