Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq20 107 3e-18 >seq20 Length=1074596 Score = 107 bits (118), Expect = 3e-18 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | || ||| || ||||| |||| |||| || || ||| || Sbjct 146801 AATTTGCATACCACCACGCAGTCGCAGGACCAGGTGCAGAGTAGATTCCTTCTGAATGTT 146860 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| | |||| || || | ||||||||||| || || | || ||| || Sbjct 146861 GTAGTCGCTGAGAGTTCGTCCGTCCTCAAGCTGTTTTCCGGCGAAGATAAGTCGCTGCTG 146920 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || || || || || || || || | |||| ||| |||||||||||| Sbjct 146921 ATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCAATAGTATCGGA 146980 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || || || || || || || || ||||| || ||||| Sbjct 146981 TGACTCTACCTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTGACAAAGATCTGCAT 147037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653196712240