Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq20 113 4e-20 >seq20 Length=1074596 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| ||| | || || || ||||| ||| |||| ||| | | Sbjct 147037 ATGCAGATCTTTGTCAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTAGAGTCATCC 146978 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | | ||||| ||||| || || || ||| | ||| ||||||| Sbjct 146977 GATACTATTGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAG 146918 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| ||||||| | || || |||||||| ||||||| ||| | ||||||||| Sbjct 146917 CAGCGACTTATCTTCGCCGGAAAACAGCTTGAGGACGGACGAACTCTCAGCGACTACAAC 146858 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| ||||| ||||| ||||| |||| || || |||| || || Sbjct 146857 ATTCAGAAGGAATCTACTCTGCACCTGGTCCTGCGACTGCGTGGTGG 146811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876279839723