Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq20 96.9 8e-15 >seq20 Length=1074596 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || ||||| ||||| || ||||| | || || || || || Sbjct 147034 CAGATCTTTGTCAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTAGAGTCATCCGAT 146975 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || |||||| ||||| || || || || || ||| ||||| || Sbjct 146974 ACTATTGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAG 146915 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||||||||||||||||| ||| | || || ||| | ||| | ||| |||||| | Sbjct 146914 CGACTTATCTTCGCCGGAAAACAGCTTGAGGACGGACGAACTCTCAGCGACTACAACATT 146855 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || |||||||| ||||| || || |||| || Sbjct 146854 CAGAAGGAATCTACTCTGCACCTGGTCCTGCGACTGCG 146817 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/133 (75%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 206248 AAGCAA--AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCG 206305 |||||| |||||||| || || || || || |||||| || || | || |||| Sbjct 147472 AAGCAANCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGATTGATTTTCG 147413 Query 206306 CCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTA 206365 |||| |||||| | || ||||| | || | |||||||||||| ||||||| ||||| | Sbjct 147412 CCGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCCGATTACAACATCCAGAAGGAGTCCA 147353 Query 206366 CTCTTCACCTTGT 206378 |||| |||||||| Sbjct 147352 CTCTGCACCTTGT 147340 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || || || || |||||| || || | || |||||||| ||| Sbjct 147812 AAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGATTGATTTTCGCCGGCAAG 147753 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | || | |||||||||||| ||||||| ||||| ||||| ||| Sbjct 147752 CAGCTTGAGGATGGCCGCACCCTCGCCGATTACAACATCCAGAAGGAGTCCACTCTGCAC 147693 Query 206374 CTTGT 206378 ||||| Sbjct 147692 CTTGT 147688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819179797547