Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq20 100 2e-16 seq2 87.8 2e-12 >seq20 Length=1074596 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| |||| || | ||||| || || ||||| ||||||||||| Sbjct 146811 CCACCACGCAGTCGCAGGACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGCTG 146870 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || |||| || |||||||| |||||| | || || ||||| |||||||| || Sbjct 146871 AGAGTTCGTCCGTCCTCAAGCTGTTTTCCGGCGAAGATAAGTCGCTGCTGATCCGGGGGA 146930 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||| || | | || || Sbjct 146931 ATGCCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCAATAGTATCGGATGACTCTACC 146990 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | || ||||| ||||| || |||||||| |||||| Sbjct 146991 TCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTGACAAAGATCTGCATA 147038 >seq2 Length=1405217 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | |||| | || |||||||| || || || | Sbjct 409131 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 409190 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||| ||||| |||||||| || | ||||| || || ||||||| || | | | Sbjct 409191 ATGAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 409250 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || || | || ||||| ||||| || || Sbjct 409251 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGAGTCTTGACG 409310 Query 27237 AAGATTTGCAT 27247 || || ||||| Sbjct 409311 AAAATCTGCAT 409321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933845858984