Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq35 102 3e-16 >seq35 Length=674057 Score = 102 bits (112), Expect = 3e-16 Identities = 129/176 (73%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||| | | |||| || || || || |||| ||||| || | || || |||||| || | Sbjct 114999 CTTTGCCCAGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATTTTCTTCAGCGGC-GCCT 115057 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | || |||||||||||| | || ||||| || ||||||| |||||||| || ||||| Sbjct 115058 TCGCTTCCATCTTCTGGCTCAAGAAGCGCGGTCTTATGCCTGGTCTGACTTTCTCTAACG 115117 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACC 443874 | || ||| ||| ||||||||| | || |||||| || || || ||| || || Sbjct 115118 AGCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCTTGCCTCCTCCACTCC 115173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588333822490615