Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq30 235 7e-57 >seq30 Length=762562 Score = 235 bits (260), Expect = 7e-57 Identities = 924/1428 (65%), Gaps = 45/1428 (3%) Strand=Plus/Plus Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740 |||||||| || ||| || | | |||||||||| | ||||| || |||||||| || Sbjct 621541 AACTCACCAGCAAGGACTCGGCGCTGGTAGATGTTGGAAGTGTAAGGCTCAAAGCACTCG 621600 Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800 ||||| |||| ||| || | ||| ||| || ||||| ||||| | | | |||||| Sbjct 621601 TTATTGCCCAGGATCTGCGAGGTACTGGCAGTGGGCATGGGTGCAAGGAGCAAACTGTTG 621660 Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA---GTTG-AGCTT 110856 || | ||| | ||||||| | || ||||| |||||||| | || | || Sbjct 621661 CGGATACCGTGTTCCTTGACCTGCTCTCTGAGAGTCTCCCAGTCCCAAAGGTCGGAG--- 621717 Query 110857 GGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAA 110916 || ||||| |||| |||| || ||||| || | || | ||| || || || |||| || Sbjct 621718 GGCTTCACGTTCC-ACATATCGAACTGGAGGATACCCTCGGAAGCAGGGGAGCCCTTGAA 621776 Query 110917 GGTTTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGAT 110975 ||| |||| ||||| | | ||||| | ||| | || || | ||||||| Sbjct 621777 GGTGGAGTAGGGACCTTCCTCCTTAGCCAGCTGCACCGAG-GCAGTGAGAGCAGCGTGAT 621835 Query 110976 ACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGC 111035 | ||||| ||||| || | || | ||| || ||| || || || | || Sbjct 621836 AGATGGTCTCAAAAATCTGCTTGTTGAGCTCACGAGCCTCAGGAGACTCGAAGGGCATGC 621895 Query 111036 GGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 111094 | || | || || ||||||| ||||| || || || | ||| ||||||| ||| ||| Sbjct 621896 G-CAGAGCAAGGAAAGCATCCGCAAGACCCTGGACGCCAACACCGATAGGTCGGTGACGC 621954 Query 111095 ATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTT 111151 || || || || || |||| || ||||| || ||||||| | ||| Sbjct 621955 ATGTTGCTGTTGCGGGC---CTCAGGGACAGGATAGTGGTTCACATCAATGATCCTGTTG 622011 Query 111152 AGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTC 111211 ||||| |||| || |||| | || || || || | ||| | | | || Sbjct 622012 AGATTGCGAACGACAACCTGGGTGACCTTGTGCAGCTTCTCGAAGTCATAGCAG-GCTTC 622070 Query 111212 -TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 111270 || | |||| ||| || || |||| ||||||| ||||| ||||| |||||| Sbjct 622071 ATCGTAGTTGATGTACGAGGGCAGAGCGAGGGATGCCAGGTTGCACACAGCAACCTCATC 622130 Query 111271 CTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATT 111330 | |||||| | ||| || || || |||||||| || ||| || |||| || Sbjct 622131 AGGGGCACAGTACTCAATAATCTCAGTGCACAAGTTGGAGCTTCGAATGGTACCCAGGTT 622190 Query 111331 CTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 111390 ||| ||||||||||| |||||| ||||||||||||||| |||| | || ||||| Sbjct 622191 CTTCTGGTTACTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCAGTCTC 622250 Query 111391 CGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTG-GCC 111448 ||||| | | |||||||| | ||| | | || | | || | |||| ||| | | Sbjct 622251 GGTCTGAGCCTCAAGAATAGCATACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGAC 622306 Query 111449 CGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGG 111506 | | || || ||||||||| || || || |||||||| || || ||||| Sbjct 622307 CCTTGCCAGCCTGCTCGTACTTCTCATACAGAGCCTCAAACTCATCGCCGTAGCAGTCGG 622366 Query 111507 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCT 111566 ||||| || || | || || | || | ||| | || | |||||| |||| Sbjct 622367 CAAGACCGGGGCACTCATTAGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCT 622426 Query 111567 TCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGT 111626 ||||||| || || || ||||| || | || || || | | ||| |||| || | Sbjct 622427 TCATGAAGAGATCGGGGATCCAGAGAGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCT 622486 Query 111627 CACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGAT 111686 || ||||| || | ||||||||||| | || ||||| |||||| |||||||| | Sbjct 622487 TGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGT 622546 Query 111687 AGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGG 111740 ||| |||| || || ||| | | ||| | || | ||||| || || ||| Sbjct 622547 AGATAGCGAAGGCACCAGGTCGCTT--GTTG-CCACCCTGGTCAACATATCGGGCAGTGT 622603 Query 111741 CGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-AT 111798 ||| || || || ||||| || | | || | || ||| || || || ||| | Sbjct 622604 TGTTGAAGACTCGGAGCATGGGGGTGACGCCGTTGGAAGTACCGTTGGTACCGGCGATGT 622663 Query 111799 ACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGA 111858 | ||| |||| | | || | || || ||||| || |||||| ||| || Sbjct 622664 AGGAG--CCGGTGGCACGGATGCGGTGCACGTTCAGACCAATGCCACCAGCCATCTTGGA 622721 Query 111859 GATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGC 111918 || ||||| | | ||||| |||||||||| | || ||||||||| || | Sbjct 622722 AATCATGGCACAGGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCCTCCTTCATGTC 622781 Query 111919 GATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGT 111978 | |||||||| |||| ||| || || || ||||||||||| || || || | Sbjct 622782 AACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGTGCCAGCATTGAATAGAGTGGGGGA 622841 Query 111979 TGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATG 112036 ||||| ||| | | |||| ||||| || ||||||||| | |||| ||||| Sbjct 622842 GGCGTGGGTGA--AGAACTTGCTCGACATGAGGTTGTATGTCTCAAGGACACGCTCAATA 622899 Query 112037 TCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084 || || || |||||| | | || ||||||| ||||| ||| ||| Sbjct 622900 TCGTCACCCCAGATGCCAACAGACACACGCATGATCATGTGCTGAGGG 622947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031160007200