Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq30 259 6e-64 seq35 129 7e-25 >seq30 Length=762562 Score = 259 bits (286), Expect = 6e-64 Identities = 933/1432 (65%), Gaps = 53/1432 (4%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| ||| | | || || || || || ||||| ||| Sbjct 622947 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGTGACGATATTGAGCGTGT 622888 Query 104281 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 104338 | | ||||||||| || ||||| |||| | | ||| ||||| | || || || Sbjct 622887 CCTTGAGACATACAACCTCATGTCGAGCAAGTTCT--TCACCCACGCCTCCCCCACTCTA 622830 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||||||||| || || ||||| |||| |||||||| | | || |||||| Sbjct 622829 TTCAATGCTGGCACTCCTCAGCCCCAGCTGTCTTCATGCTTCCTGGTTGACATGAAGGAG 622770 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| || | |||||||||| ||||| | | ||||| || || ||| |||| Sbjct 622769 GACAGCATTGAGGGTATCTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGATGGCT 622710 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 104516 || || ||||| || || | || | | |||| ||| || ||| || | Sbjct 622709 GGTGGCATTGGTCTGAACGTGCACCGCATCCGTGCCACCGG--CTCCTACATCGCCGGTA 622652 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || ||| || | || | | || ||||| || || || ||| ||| || || | Sbjct 622651 CCAACGGTACTTCCAACGGCGTCACCCCCATGCTCCGAGTCTTCAACAACACTGCCCGAT 622592 Query 104577 ATGTAAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCAT 104630 |||| | || | ||| | | ||| || || |||| |||| |||||||| | Sbjct 622591 ATGTTGACCAGGGTGG-CAAC--AAGCGACCTGGTGCCTTCGCTATCTACCTTGAGCCCT 622535 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--C 104688 ||||| ||||| || | ||||||||||| |||| ||||| || | ||||||| | Sbjct 622534 GGCACTCGGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTTC 622475 Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748 ||| | ||||| || ||| ||||||||||| || ||||||||||||||| | ||||| Sbjct 622474 GCGCT--CGCGACCTGTTCCTTGCTCTCTGGATCCCCGATCTCTTCATGAAGCGTGTTGA 622417 Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT 104808 | ||| ||| | ||| | ||| | || || | || || ||||| |||| | Sbjct 622416 GAAGAACGGCGACTGGACCCTCATGTGCCCTAATGAGTGCCCCGGTCTTGCCGACTGCTA 622357 Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--G 104866 || || |||||||| || || || ||||||||| | | || | | | | || | Sbjct 622356 CGGCGATGAGTTTGAGGCTCTGTATGAGAAGTACGAGCAGGCTGG-CAAGGGTC-GCAAG 622299 Query 104867 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 || | | || | || | | ||| | |||||||| || |||| ||||||||||| | Sbjct 622298 ACCAT-CAAGGCTCAGAAGCTCTGGTATGCTATTCTTGAGGCTCAGACCGAGACTGGCAA 622240 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || | |||||| ||||| ||| ||| |||| |||||||| || ||||| ||||| Sbjct 622239 CCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGGTAC 622180 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 || || ||||| | || || || || | || | | | |||||| || Sbjct 622179 CATTCGAAGCTCCAACTTGTGCACTGAGATTATTGAGTACTGTGCCCCTGATGAGGTTGC 622120 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--A 105103 |||||| ||||| ||||| ||||||| ||| ||| | | | || ||| | Sbjct 622119 TGTGTGCAACCTGGCATCCCTCGCTCTGCCCTCGTACATCAA--CTACGATGAAGCCTGC 622062 Query 105104 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163 | ||| | || || || ||| | || || | |||| || || ||||| | Sbjct 622061 TATGACTTCGAGAAGCTGCACAAGGTCACCCAGGTTGTCGTTCGCAATCTCAACAGGATC 622002 Query 105164 ATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 |||||| || || || || |||| || || || || ||| | ||||| Sbjct 622001 ATTGATGTGAACCACTATCCTGTCCCTGAG---GCCCGCAACAGCAACATGCGTCACCGA 621945 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 105279 || || ||| | || || |||||||| ||||||| ||| || || || ||| | || Sbjct 621944 CCTATCGGTGTTGGCGTCCAGGGTCTTGCGGATGCTTTCCTTGCTCTG-CGCATGCCCTT 621886 Query 105280 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGC 105339 || || || || || |||| || || ||||||||||| |||||||| || Sbjct 621885 CGAGTCTCCTGAGGCTCGTGAGCTCAACAAGCAGATTTTTGAGACCATCTATCACGCTGC 621826 Query 105340 TCT---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396 ||| || || || | || |||| ||| || ||||| || ||||| |||| Sbjct 621825 TCTCACTGCCTCG-GTGC--AGCTGGCTAAGGAGGAAGGTCCCTACTCCACCTTCAAGGG 621769 Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGC 105452 || || ||||| | || | || || || ||||||| |||| |||| || | | Sbjct 621768 CTCCCCTGCTTCCGAGGGTATCCTCCAGTTCGATATGT-GGAACGTGAAGCCCTCCGACC 621710 Query 105453 TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 105512 || | |||||||| |||||| || | ||||||| | ||| | || |||||| Sbjct 621709 TT---TGGGACTGGGAGACTCTCAGAGAGCAGGTCAAGGAACACGGTATCCGCAACAGTT 621653 Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572 | ||| | || || ||||| || ||| ||| | || ||| |||| ||||| || |||| Sbjct 621652 TGCTCCTTGCACCCATGCCCACTGCCAGTACCTCGCAGATCCTGGGCAATAACGAGTGCT 621593 Query 105573 TTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTT 105624 |||| || ||||| | |||||||| | | | || ||| || || ||||| Sbjct 621592 TTGAGCCTTACACTTCCAACATCTACCAGCGCCGAGTCCTTGCTGGTGAGTT 621541 >seq35 Length=674057 Score = 129 bits (142), Expect = 7e-25 Identities = 295/436 (68%), Gaps = 6/436 (1%) Strand=Plus/Plus Query 94523 ACATCCTGGCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAATATCAATAACAACT 94582 ||||||| || |||||||||| || ||||| ||||| ||||| || | | | Sbjct 114725 ACATCCTTGCCTTCTTTGCTGCTTCTGATGGCATTGTCAACGAGAACCTCGTTGAGCGGT 114784 Query 94583 TTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATAAT 94641 | || ||||| || |||| |||| || ||| |||||||| | ||| |||| || Sbjct 114785 TCAGTGGCGAGGTCCAGATCC-CTGAGGCCCGATGCTTCTATGGATTCCAGA-TCATGAT 114842 Query 94642 GAA-ATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGC 94700 | | | | ||| ||||| ||| || || |||| || || ||||| | | Sbjct 114843 GGAGAATATCCATTCTGAGACCTACTCGCTGCTTATCGACACTTACATCAAGGAGCCTTC 114902 Query 94701 TGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGA 94760 | || | | ||||| | || ||| | || | || ||||| | |||||| || || Sbjct 114903 TCAGCGCACCTACCTCTTCAATGCTATCGAGACCATCCCCTGTATCCGAAAGAAGGCCGA 114962 Query 94761 TTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCAT 94819 |||||| || ||| | | |||| | | ||||||||| |||| || | || | Sbjct 114963 TTGGGCCATCCGATGGATCCAGGACAAGAACTC-TTCCTTTGCCCAGCGTCTGGTTGCCT 115021 Query 94820 TTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGA 94879 | || ||| |||||||| |||||| || ||||| | || | |||||||||| Sbjct 115022 TCGCTGCTGTCGAGGGTATTTTCTTCAGCGGCGCCTTCGCTTCCATCTTCTGGCTCAAGA 115081 Query 94880 AGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGAC 94939 |||| ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| | Sbjct 115082 AGCGCGGTCTTATGCCTGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTC 115141 Query 94940 TCCACCAAGAGTTTGC 94955 ||||| || ||||| Sbjct 115142 TCCACACCGACTTTGC 115157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260019888680