Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq26 84.2 2e-11 >seq26 Length=867789 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 29839 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTA 29898 ||||||| | || || | ||| | || || || || | || |||| ||| ||||| Sbjct 13472 GGGAAAGTCGCGTGGTTCGCGCTCCAATTGCGTATTGAGGGCCTCGACGTGATCGAGGTA 13531 Query 29899 GACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29958 ||||| ||||| |||| | || || |||||| | | | || |||||| || Sbjct 13532 CACGTGGGCGTCACCCATGACATGAGTAAGGCTTCCCGGGACCATCTCGCAGACGTGCGC 13591 Query 29959 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 30018 || ||||| ||| || || | |||||| || || || || || || || || ||||| || Sbjct 13592 CAGCATGTGCGTTAGAAGGGCGTAGCTAGCAATATTGAACGGAACACCAAGACCCATATC 13651 Query 30019 CCCCGACCTCTGGTAGAGCTGACA 30042 | |||||||||||||| || || Sbjct 13652 GCAAGACCTCTGGTAGAGTTGGCA 13675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309870145844