Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31]
107 sequences; 53,748,257 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq65 89.7 4e-13
seq26 89.7 4e-13
>seq65
Length=1864066
Score = 89.7 bits (98), Expect = 4e-13
Identities = 130/179 (73%), Gaps = 6/179 (3%)
Strand=Plus/Plus
Query 48511 GTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-CTT 48569
|||||||| | | |||||| ||| | || |||| |||||||||||||| || | |
Sbjct 1169642 GTCAAGGTTCGTGTCAGGACCACCAAGATTCCCCAGATCGGTGACAAGTTTGCCTCTCGT 1169701
Query 48570 CACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGAGGACATGCCCTTCGAC 48627
||||| |||||||| ||| ||| | | | ||| || ||||| ||||| ||| |
Sbjct 1169702 CACGGT-CAAAAGGGTACAATTGGTGT--TACATACCGACAAGAGGATATGCCTTTCACC 1169758
Query 48628 AAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 48686
| ||| || ||| ||| || | |||||||||||||||||| |||| || | |||||
Sbjct 1169759 AGGGAGGGTGTGACGCCAGATATTATCATCAACCCCCACGCCATTCCGTCGCGAATGAC 1169817
>seq26
Length=867789
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27105 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 27164
||||||| | || || | ||| | || || || || | || |||||||| |||||
Sbjct 13472 GGGAAAGTCGCGTGGTTCGCGCTCCAATTGCGTATTGAGGGCCTCGACGTGATCGAGGTA 13531
Query 27165 GACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 27224
||||| ||||| |||| | || || |||||| | | | || |||||| ||
Sbjct 13532 CACGTGGGCGTCACCCATGACATGAGTAAGGCTTCCCGGGACCATCTCGCAGACGTGCGC 13591
Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284
|| ||||| ||| || || | |||||| || || || || || || || || ||||| ||
Sbjct 13592 CAGCATGTGCGTTAGAAGGGCGTAGCTAGCAATATTGAACGGAACACCAAGACCCATATC 13651
Query 27285 CCCCGACCTCTGGTAGAGCTGACA 27308
| |||||||||||||| || ||
Sbjct 13652 GCAAGACCTCTGGTAGAGTTGGCA 13675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369506718139517
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |