Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq61 127 4e-24 seq1 84.2 5e-11 >seq61 Length=1579179 Score = 127 bits (140), Expect = 4e-24 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473 |||||||| | ||| || | || ||| ||| ||||||||||| | | || ||| Sbjct 1456498 AGGAGTTCCTCACTGAGGCCCTCCCCTGTGCCCTGCTTGGCATGAACTCCAATCTCATGA 1456439 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 |||||||| || || || || ||||| | | || ||||| || ||||||| || | Sbjct 1456438 AGCAGTACATTGAGTTTGTCGCTGACCGTCTGCTCGTCGCACTCGGCAACGAGAAGGTCT 1456379 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 |||| | | |||||||| | || |||||| ||| || ||| || |||||||||| Sbjct 1456378 ACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACT 1456319 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||| ||||||||| |||||| |||| | ||||||| Sbjct 1456318 TCTTCGAGAAGCGTGTCGCTGACTACCAGAAGGCTGGTGT 1456279 >seq1 Length=5443851 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 319812 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAG 319871 |||||| ||||| || ||| | |||| || | | ||| |||||| || |||| Sbjct 2625166 GTCGAGGTCGTGCTCGACGAAGACAGTCTTGACCTCGTCCTGCTTGGGGAAACCCTCAAC 2625225 Query 319872 CTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAG 319931 ||| |||| || |||||||| || || || || || | ||||| || || || || Sbjct 2625226 CTGCTCGTTGTTGATGGCGCGCATAAGAGTGGACTTTCCGGAACCGTTGGGACCGCAAAG 2625285 Query 319932 ACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACC 319991 |||||| || | || || || ||| || | || | ||| |||||||| || |||| Sbjct 2625286 ACCGTAACGCTGACCACGCTTGAGGCGGAGATGGGTCTGGTTGAGAAGAATCTTGGCACC 2625345 Query 319992 ATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || || ||||| || ||| | || ||||||||||| Sbjct 2625346 GTAGGCAAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 2625384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823146137690