Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq61 87.8 2e-12 >seq61 Length=1579179 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || || ||||| ||| || | || ||||| ||||||||||| || || Sbjct 1456849 ATGTAGGTGTCAATGAGCAGGGAATAGGTCTCCGAGTGAATGTTCTCCATCATGATTTGG 1456908 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 |||||||| |||||||| || || | || || || || || |||||| || | ||| Sbjct 1456909 AATCCGTAGAAGCATCGAGCCTCAGGGATCTGGACCTCGCCGCTGAATCGCTCAACGAGA 1456968 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| || ||||| ||| ||| ||||| || || | || || ||||| | Sbjct 1456969 TTCTCGTTGACAATGCCATCGGACGCAGCGAAGAAGGCAAGGATGTGAGAGATGAAGAAC 1457028 Query 17414 TTTTCGTCCGGTGTAAGA---ACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 | || || | || ||| | |||||| | | || ||||| | ||| | || Sbjct 1457029 TGCTCATCAGTGGTCAGACGGTTGTTCCAGTCGTGGAGGTCCTTGGAGAGATCAATCTCC 1457088 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 |||| ||||| || |||| | ||||| || ||||| | ||| || Sbjct 1457089 TCGGCAGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCCAGAT 1457135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545192432840