Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq44 190 2e-43 seq61 131 2e-25 >seq44 Length=2799272 Score = 190 bits (210), Expect = 2e-43 Identities = 743/1154 (64%), Gaps = 28/1154 (2%) Strand=Plus/Plus Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 |||| || || || || ||||| || ||||||| || | || | || |||||| Sbjct 2095148 GCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCA 2095207 Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824 ||||| |||||| | |||||| || | || | || || ||||| |||||| Sbjct 2095208 GTGCACAGATTAGAGCTTCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAG 2095267 Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884 |||||||| ||||| ||||| || | || || || |||||| || | || || | | Sbjct 2095268 GCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCAAGGATGGCATAC 2095327 Query 53885 CAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTA--TAGTG 53939 || | ||||||| || || ||| | ||| ||| || ||||| | | Sbjct 2095328 CAAAGCTTCTGAGCCTTGATG---GACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCG 2095384 Query 53940 TATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 53999 || | | |||||||| || || | | | | | ||||| || || | || | Sbjct 2095385 TAGAGGGCC--TCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGC 2095442 Query 54000 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 54059 |||| | | ||||||||||| | || || || ||||| || |||||||| ||||| | Sbjct 2095443 ACATAAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAGA 2095502 Query 54060 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 54119 | || | || || || | || | ||||| || || |||||| ||||| | Sbjct 2095503 GGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAA 2095562 Query 54120 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTT 54179 ||||| | | | ||||| ||||| || || | ||| |||| | | | ||||| || | Sbjct 2095563 GGAACTCGAAGACATCAGCGTGCCAAGGCTCTAGGTAGATGGCAAAAGCACCAGGTCGCT 2095622 Query 54180 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 54239 |||| || |||||||| | ||| | || ||||| || | || | | ||| |||| || Sbjct 2095623 TGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAA 2095682 Query 54240 TACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACT 54297 ||| ||||||| ||| ||||| || | || ||| ||| ||||||| || | Sbjct 2095683 CACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGGG 2095742 Query 54298 AATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 54357 |||| ||||| || || || ||||| || || || | || || || | ||||| Sbjct 2095743 CATTG--AGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATC 2095800 Query 54358 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 54417 |||||| || || || || || ||| |||||| || | || || || | ||| | Sbjct 2095801 ATAGATACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAGGAAAGCTGGGG 2095860 Query 54418 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 54477 || || || ||||| || | ||| || ||||| || || || | || || | Sbjct 2095861 TTGAGGGGTACCAGCATTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACAT 2095920 Query 54478 TAGATTGTACGTCT---CGATA-GCTGAGTCT-AT-ATCCCATTGATGAATTCCTACTGC 54531 || || || |||| ||| | ||| | | | || | |||| |||| || | | Sbjct 2095921 AAGGTTATATGTCTCCACGACACGCTCAATATCATCACCCCA--GATG----CCAATAGA 2095974 Query 54532 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTA 54591 |||||||| | |||||||||||| | || || |||||| || || || || | ||| Sbjct 2095975 CACACGCATGATCATGTGCTGAGGACGCTCGACAATCTTGCCGTCAATCTTGAGGAGGTA 2096034 Query 54592 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 54651 ||| ||||| || || || ||||| || | |||| || || || ||||| | ||| Sbjct 2096035 TGATCGCTCCAATGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTCGTAGACAAT 2096094 Query 54652 AACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAA 54710 | |||| || | ||||| | | |||| || ||| | | ||| || || | Sbjct 2096095 GGCAGAGTCTAGCTCTTCCTTGTGTCGCATAAC-GCACTCATAGGTCTCCTTGGAGATCA 2096153 Query 54711 TCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCAC 54770 | || || | || || | | ||||| ||||| ||| ||| ||| || | Sbjct 2096154 TAGGTGACGGCCGGCCGTTCCTGGCGTTGACGTAGTTGTATAGATCGCTCACAACGGTAG 2096213 Query 54771 TAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGG 54830 || | || || || | ||||| || || || ||||| || | ||| || || |||| Sbjct 2096214 ACCATTGCTTCTTGGTCTGCTTGTGAAGGTTGGAGACGGCAATACGAGCCGCAAGGATGG 2096273 Query 54831 CATAATCCGGATGT 54844 | || || |||||| Sbjct 2096274 CGTAGTCGGGATGT 2096287 >seq61 Length=1579179 Score = 131 bits (144), Expect = 2e-25 Identities = 366/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || ||||| ||| ||| |||||||| || | | || | |||||||| || || || Sbjct 1456579 CAGGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1456638 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| ||||||||||| || ||||| || ||||| ||||| | ||| ||||| Sbjct 1456639 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1456698 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGT 24311 || || || || || || ||||||| || | | || | | | | |||| || Sbjct 1456699 ATACCCTCGACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGTAGAGTCCTTGTCCTGG 1456758 Query 24312 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370 ||||| | || ||||| || ||||||||| | || || || || || | ||| || Sbjct 1456759 ATCCATCGAATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGTT 1456817 Query 24371 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 24430 ||||| ||| || | ||||| | || || ||||| | || ||| | Sbjct 1456818 GAAGAGGTAGGTTCGCTGGGCGGGCTCTTTGATGTAGGTGTCAATGAGCAGGGAATAGGT 1456877 Query 24431 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 24490 ||||| |||||||| || || ||||| ||||||||||| |||| |||||| | || Sbjct 1456878 CTCCGAGTGAATGTTCTCCATCATGATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGAT 1456937 Query 24491 CTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 24550 ||| || || | ||||| || | | ||| || || || || || || || || Sbjct 1456938 CTGGACCTCGCCGCTGAATCGCTCAACGAGATTCTCGTTGACAATGCCATCGGACGCAGC 1456997 Query 24551 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCA 24607 || || || | | || || || | | || || | || | | || ||||| Sbjct 1456998 GAAGAAGGCAAGGATGTGAGAGATGAAGAACTGCTCATCAGTGGTCAGACGGTTGTTCCA 1457057 Query 24608 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 24667 || | || || || || | ||| | || || | ||||| || || ||||| ||||| Sbjct 1457058 GTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCGGCCTT 1457117 Query 24668 TTTATACATATTCCAGAT 24685 || ||||| | |||||| Sbjct 1457118 CTTGTACATTTGCCAGAT 1457135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721132444240