Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq44 122 2e-22 >seq44 Length=2799272 Score = 122 bits (134), Expect = 2e-22 Identities = 182/253 (72%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| ||||||| || || || ||| || |||||||| ||||| |||||| Sbjct 2095757 CCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATCATAGATACCGTCAATG 2095816 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910 || || || | | | | | | |||||| |||||||| |||||| ||| | | ||| Sbjct 2095817 CTGTCCTCCTTCATGTCAACCAAGAAGCATGAGGAAAGCTGGGGT-TGAGGGGTACCAGC 2095875 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| || || ||||||||||||||||| || | | || ||||| || | |||||| || Sbjct 2095876 ATTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACATAAGGTTATATGTCTC 2095935 Query 94971 AATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029 | |||| | || || | | || | ||||| | || ||||||||| ||||||| || Sbjct 2095936 CACGACACGCTCAATATCATCACCCCAG-ATGCCAATAGACACACGCATGATCATGTGCT 2095994 Query 95030 GAGGGCGCTCAAC 95042 |||| ||||| || Sbjct 2095995 GAGGACGCTCGAC 2096007 Score = 91.5 bits (100), Expect = 3e-13 Identities = 120/165 (73%), Gaps = 6/165 (4%) Strand=Plus/Plus Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451 ||| || ||||| ||| || |||||||| | |||| ||||||||| || | | ||| Sbjct 2095357 ACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTTCACCGTAGCAGTC 2095416 Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---AC 94508 || ||| ||||||||||||| ||||||||| |||| ||| || || |||| || Sbjct 2095417 GGCAAGACCAGGGCACTCGTTGGGGCACATAAGGGTCCA---CTCTCCGTTCTTCTCAAC 2095473 Query 94509 TCTCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553 | || |||||| ||||||| | ||||| || |||| || || Sbjct 2095474 ACGCTTCATGAAAAGATCAGGGATCCAGAGGGCCAGGAACAGGTC 2095518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583201220165