Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq44 172 7e-38 seq61 131 2e-25 >seq44 Length=2799272 Score = 172 bits (190), Expect = 7e-38 Identities = 740/1155 (64%), Gaps = 30/1155 (3%) Strand=Plus/Plus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 |||| || || || || ||||| || ||||||| || | || | || |||||| Sbjct 2095148 GCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCA 2095207 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 ||||| |||||| | |||||| || | || | || || ||||| |||||| Sbjct 2095208 GTGCACAGATTAGAGCTTCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAG 2095267 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 |||||||| ||||| ||||| || | || || || |||| | || | || || | | Sbjct 2095268 GCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCAAGGATGGCATAC 2095327 Query 65916 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTA--TAGT 65969 || | | || ||||||| || || ||| | ||| ||| || ||||| | Sbjct 2095328 CAAA-GCTTCTGAGCCTTGATG---GACTTGCGACCCTTACCTTCCCTCTCGTACTTCTC 2095383 Query 65970 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 66029 ||| | | || ||||| || || | | | | | ||||| || || | || Sbjct 2095384 GTAGAGGGCC--TCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGG 2095441 Query 66030 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 66089 ||||| | | ||||||||||| | || || || ||||| || |||||||| ||||| Sbjct 2095442 CACATAAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAG 2095501 Query 66090 AGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 66149 || || | || | || | || | ||||| || || |||||| ||||| Sbjct 2095502 AGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCA 2095561 Query 66150 AGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 66209 |||||| | | | |||| ||||| || || | ||| ||||| | | | ||||| || Sbjct 2095562 AGGAACTCGAAGACATCAGCGTGCCAAGGCTCTAGGTAGATGGCAAAAGCACCAGGTCGC 2095621 Query 66210 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 66269 ||||| || |||||||| | ||| | || ||||| || | || | | ||| |||| | Sbjct 2095622 TTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACA 2095681 Query 66270 ATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTAC 66327 | ||| ||||||||||| ||||| || | || ||| ||| | ||||| || | Sbjct 2095682 ACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGG 2095741 Query 66328 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 66387 |||| ||||| || || || ||||| || || || | || || || | |||| Sbjct 2095742 GCATTG--AGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTAT 2095799 Query 66388 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 66447 ||||||| || || || || || ||| |||||| || | || || || | ||| Sbjct 2095800 CATAGATACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAGGAAAGCTGGG 2095859 Query 66448 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 66507 | || || || ||||| || | ||| || ||||| || || || | || || | Sbjct 2095860 GTTGAGGGGTACCAGCATTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACA 2095919 Query 66508 GTAGATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCG 66563 || || || ||||| | | || ||||| || |||| || | | Sbjct 2095920 TAAGGTTATATGTCTCCACGACACGCTCAATATCATCACCCCAGATG----CCAATAGAC 2095975 Query 66564 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 66623 |||||||| | |||||||||||| | || || |||||| || || || | | ||| Sbjct 2095976 ACACGCATGATCATGTGCTGAGGACGCTCGACAATCTTGCCGTCAATCTTGAGGAGGTAT 2096035 Query 66624 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 66683 ||| ||||| || || || ||||| || | |||| || || || ||||| | ||| Sbjct 2096036 GATCGCTCCAATGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTCGTAGACAATG 2096095 Query 66684 ACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAAT 66742 | |||| || | ||||| | | |||| || ||| | | ||| || || || Sbjct 2096096 GCAGAGTCTAGCTCTTCCTTGTGTCGCATAAC-GCACTCATAGGTCTCCTTGGAGATCAT 2096154 Query 66743 CGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATC-CTC-CATCACTTCA 66800 || || | || || | | ||||| |||||| ||| ||| ||| || | | | Sbjct 2096155 AGGTGACGGCCGGCCGTTCCTGGCGTTGACGTAGTTGTATAGATCGCTCACAACGGTAGA 2096214 Query 66801 CTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATG 66860 | || | || || || | ||||| || || || ||||| || | ||| || | ||| Sbjct 2096215 C--CATTGCTTCTTGGTCTGCTTGTGAAGGTTGGAGACGGCAATACGAGCCGCAAGGATG 2096272 Query 66861 GCATAATCCGGATGT 66875 || || || |||||| Sbjct 2096273 GCGTAGTCGGGATGT 2096287 >seq61 Length=1579179 Score = 131 bits (144), Expect = 2e-25 Identities = 366/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || ||||| ||| ||| |||||||| || | | || | |||||||| || || || Sbjct 1456579 CAGGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1456638 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| ||||||||||| || ||||| || ||||| ||||| | ||| ||||| Sbjct 1456639 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1456698 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 36334 || || || || || || ||||||| || | || || | | | | |||| || Sbjct 1456699 ATACCCTCGACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGTAGAGTCCTTGTCCTGG 1456758 Query 36335 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393 ||||| | || ||||| || ||||||||| | || || || || || | ||| || Sbjct 1456759 ATCCATCGAATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGTT 1456817 Query 36394 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 36453 ||||| ||| || | ||||| | || || ||||| | || ||| | Sbjct 1456818 GAAGAGGTAGGTTCGCTGGGCGGGCTCTTTGATGTAGGTGTCAATGAGCAGGGAATAGGT 1456877 Query 36454 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 36513 ||||| |||||||| || || ||||| ||||||||||| |||| |||||| | || Sbjct 1456878 CTCCGAGTGAATGTTCTCCATCATGATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGAT 1456937 Query 36514 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 36573 ||| || || | ||||| || | | ||| || || || || || || || || Sbjct 1456938 CTGGACCTCGCCGCTGAATCGCTCAACGAGATTCTCGTTGACAATGCCATCGGACGCAGC 1456997 Query 36574 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTA---GTTTATTCCA 36630 || || || | | || || || | | || | | || | | || ||||| Sbjct 1456998 GAAGAAGGCAAGGATGTGAGAGATGAAGAACTGCTCATCAGTGGTCAGACGGTTGTTCCA 1457057 Query 36631 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 36690 || | || || || || | ||| | || || | ||||| || || ||||| ||||| Sbjct 1457058 GTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCGGCCTT 1457117 Query 36691 TTTATACATATTCCAGAT 36708 || ||||| | |||||| Sbjct 1457118 CTTGTACATTTGCCAGAT 1457135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172281688920