Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq11 104 2e-17 seq55 102 8e-17 >seq11 Length=779747 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||||||| |||| || |||||||| |||||| Sbjct 735637 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 735578 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || || ||||| || || || ||||| || ||||| ||| || || Sbjct 735577 GCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 735518 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||||| | ||||||||||| ||| | |||||| || || | || Sbjct 735517 ACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTC 735458 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 735457 TTGACGAAAATCTGCAT 735441 >seq55 Length=1684425 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||| || |||||||| ||||| | |||| ||||| ||||| || ||| Sbjct 937722 GTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCA 937781 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || | |||| || |||||||| ||||| ||||| || ||||| ||| | || | || Sbjct 937782 GCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC-TGAATCTTGGACTT 937840 Query 139688 AGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | ||||||| | ||| ||||| | ||| | |||||||||||||| || Sbjct 937841 GACATTGTCGATAGTGTCGGAAGACTCAACCTCTAGGGTGATGGTCTTGCCGGTCAAGGT 937900 Query 139747 TTTTACGAATATTTGCAT 139764 || ||||| |||||||| Sbjct 937901 CTTGACGAAGATTTGCAT 937918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063609349600