Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq44 187 4e-42 seq61 132 7e-26 >seq44 Length=2799272 Score = 187 bits (206), Expect = 4e-42 Identities = 632/974 (65%), Gaps = 24/974 (2%) Strand=Plus/Plus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 || || || || ||||| || ||||||| || | || | || || |||||||| Sbjct 2095154 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCAC 2095213 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 || ||| | ||||| || | || | || || ||||| |||||| |||||| Sbjct 2095214 AGATTAGAGCTTCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCC 2095273 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 || ||||| ||||| || | || || || |||| | || | || || | ||| | | Sbjct 2095274 TTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCAAGGATGGCATACCAAA-G 2095332 Query 79801 ACTC-GAGCCTTTATTATAGACTTGTATCTCTT---TTCTCTTTCGTA-TTGT-GTATAT 79854 || ||||||| || |||||| | ||| ||| || ||||| || | ||| | Sbjct 2095333 CTTCTGAGCCTTGATG---GACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAG 2095389 Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914 | || ||||| || || | ||| | | ||||| || |||| || ||||| Sbjct 2095390 GGCC--TCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATA 2095447 Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 79974 | | ||||||||| | | || || || ||||| || |||||||| ||||| || || Sbjct 2095448 AGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAGAGGGCC 2095507 Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034 | || || || | || | |||||| || || |||||| ||||| |||||| Sbjct 2095508 AGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAAC 2095567 Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094 | | | ||||| ||||| || || | ||| ||||| | | | || ||||| ||||| Sbjct 2095568 TCGAAGACATCAGCGTGCCAAGGCTCTAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTA 2095627 Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 || |||||||| | ||| | || ||||| || | || | | ||| |||| || ||| Sbjct 2095628 CCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAACACCG 2095687 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTG 80212 ||||||||||| ||||| || | || ||| ||| ||||||| || | |||| Sbjct 2095688 TTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGGGCATTG 2095747 Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272 ||||| || || || ||||| || || || | || || || | |||||||||| Sbjct 2095748 --AGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATCATAGA 2095805 Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332 | || || ||||| || || |||||| || | || || || | ||| | || Sbjct 2095806 TACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAGGAAAGCTGGGGTTGAG 2095865 Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392 || || ||||| || | ||| || ||||| || || || | || |||| || | Sbjct 2095866 GGGTACCAGCATTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACATAAGGT 2095925 Query 80393 TGTACGTCTCAATAGCTGATTCTATATC----CCATTGATGAATTCCTACCGCGACACGC 80448 | || ||||| | | || ||||| || |||| || | | |||||| Sbjct 2095926 TATATGTCTCCACGACACGCTCAATATCATCACCCCAGATG----CCAATAGACACACGC 2095981 Query 80449 ATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTT 80508 || | |||||||||||| | || || |||||| | || || | | ||| ||| Sbjct 2095982 ATGATCATGTGCTGAGGACGCTCGACAATCTTGCCGTCAATCTTGAGGAGGTATGATCGC 2096041 Query 80509 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAG 80568 ||||| || || || ||||| || | |||| || || || ||||| | ||| | ||| Sbjct 2096042 TCCAATGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTCGTAGACAATGGCAGAG 2096101 Query 80569 TTGAGTTTATCCTT 80582 | || | ||||| Sbjct 2096102 TCTAGCTCTTCCTT 2096115 >seq61 Length=1579179 Score = 132 bits (146), Expect = 7e-26 Identities = 278/411 (68%), Gaps = 5/411 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| ||| |||||||| || | | || || |||||||| || || || Sbjct 1456579 CAGGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1456638 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||||||||| || ||||| || ||||| ||||| | ||| |||||| Sbjct 1456639 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1456698 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA---ACTGGCGCTGTCATGT 50136 || || || || || || |||||||| || | || || | | | | |||| || Sbjct 1456699 ATACCCTCGACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGTAGAGTCCTTGTCCTGG 1456758 Query 50137 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | || ||||| || ||||||||| | || || || || || | || || Sbjct 1456759 ATCCATCGAATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGTT 1456817 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||||| ||| || | ||||| | || || || || | || ||| | Sbjct 1456818 GAAGAGGTAGGTTCGCTGGGCGGGCTCTTTGATGTAGGTGTCAATGAGCAGGGAATAGGT 1456877 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 ||||| |||||||| || || || || ||||||||||| |||| |||||| | || Sbjct 1456878 CTCCGAGTGAATGTTCTCCATCATGATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGAT 1456937 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366 ||| || || | ||||| ||| | | ||| || || || || || || Sbjct 1456938 CTGGACCTCGCCGCTGAATCGCTCAACGAGATTCTCGTTGACAATGCCATC 1456988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268234363320