Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq61 289 4e-73 seq44 145 1e-29 >seq61 Length=1579179 Score = 289 bits (320), Expect = 4e-73 Identities = 586/849 (69%), Gaps = 33/849 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| ||||| ||||| | ||| ||| | ||||| Sbjct 1457135 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCCGAGGAGATTGATCTC 1457076 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC---TGAAACTGAGCGAGAGTTTATA 125135 ||||||||||| |||| ||| | | ||| |||| ||| ||||| || || Sbjct 1457075 TCCAAGGACCTCCACGACTGGAACAACCGTCTGACCACTGA---TGAGCAGTTCTTCATC 1457019 Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGAC 125194 || ||||| | |||||||| || | |||||||| || |||||||| ||||| ||||| Sbjct 1457018 TCTCACATCCTTGCCTTCTTCGCTGCGTCCGATGGCATTGTCAACGAGAATCTCGTTGAG 1456959 Query 125195 ACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCA 125253 |||||| ||| | || || |||| ||| ||||| |||||||||||||||| Sbjct 1456958 -CGATTCAGCGGCGAGGTCCAGATCCCTGAGGC-TCGATGCTTCTACGGATTCCAAATCA 1456901 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC 125313 |||| |||||| | |||||||| | || || || ||||||| ||||| || | Sbjct 1456900 TGATGGAGAACATTCACTCGGAGACCTATTCCCTGCTCATTGACACCTACATCAAAGAGC 1456841 Query 125314 C-GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 | || | ||| | ||||| ||||| | || || | || | || || || ||| Sbjct 1456840 CCGCCCAGCGAACCTAC-CTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAAG 1456782 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 ||| | |||| ||||| |||||| | ||| | | ||| | | ||| | | ||||| Sbjct 1456781 GCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTCTACCTTTGCCCAGCGTCTGGTT 1456722 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || ||||| || || ||||| |||||||| ||| ||||| ||||||| |||||| Sbjct 1456721 GCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGGCTC 1456662 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || ||||||||||| ||||| | |||||| | || ||||| || ||| Sbjct 1456661 AAGAAGCGTGGCCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAG 1456602 Query 125553 GGCCTACACTGTGACTTTGCCATTCTAC-TGTTTCGCAACTATCTGCGTCCCGAGTGCAG 125611 || || ||| ||||| ||| || | | || || | || | || |||| Sbjct 1456601 GGTCTTCACACCGACTTCGCCTGCCTTCTTCACTCCCACC--TCAAGGGCC---GTGC-T 1456548 Query 125612 ATCCAGC-GATGA-AAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAG 125669 | | ||| ||||| ||| ||||| |||| |||||||| | || || || ||| Sbjct 1456547 AGCAAGCAGATGATCCAGGACATCA--TTTGT----GATGCCGTCACCATTGAGCAGGAG 1456494 Query 125670 TTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAG 125729 || || || || |||| || | || |||||||||||| ||| || ||| || Sbjct 1456493 TTCCTCACTGAGGCCCTCCCCTGTGCCCTGCTTGGCATGAACTCCAATCTCATGAAGCAG 1456434 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTAC 125786 ||||| |||||||| || || ||||| || || | ||| || ||| | ||| Sbjct 1456433 TACATTGAGTTTGTCGCTGACCGTCTGCT---CGTCGCACTCGGCAACGAGAAGGTCTAC 1456377 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 || |||| || ||||| || |||||| | ||| || || | || ||||||||||| Sbjct 1456376 AAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTC 1456317 Query 125847 TTCGAGAAG 125855 ||||||||| Sbjct 1456316 TTCGAGAAG 1456308 >seq44 Length=2799272 Score = 145 bits (160), Expect = 1e-29 Identities = 312/463 (67%), Gaps = 14/463 (3%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| || || || || || || ||| | ||| ||||| | || ||| Sbjct 2095647 CGCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCCATCTACCTAGAGCCT 2095588 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| || || || || || | || | || || ||| || || |||| Sbjct 2095587 TGGCACGCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 2095528 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---C 97040 || ||| | ||| |||| || |||||| | || ||| | ||||||||||| || Sbjct 2095527 CGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGATCTTTTCATGAAGCGTGTTGAG 2095468 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 || |||| | | |||| ||| ||||||||| || || || ||||| |||| ||| Sbjct 2095467 AAGAACGGAG---AGTGGACCCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGC 2095411 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160 | || ||||||||||||||| ||| | |||| |||||| | || | | Sbjct 2095410 TACGGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACG----AGAGGGAAGGTAAGGGTCG 2095355 Query 97161 CGAGTCGATGCACG---AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGG 97216 | |||| || | | |||| || ||| | |||||| | ||| ||| ||||| || Sbjct 2095354 CAAGTCCATCAAGGCTCAGAAGCTTTGGTATGCCATCCTTGAGGCCCAGACCGAGACCGG 2095295 Query 97217 AACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGG 97276 || || | ||| || ||||||||| || || ||||| |||||||| || | || Sbjct 2095294 AAACCCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGG 2095235 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 |||||| |||| ||||||||||| || || | |||||| Sbjct 2095234 TACCATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTAC 2095192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058616415880