Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq61 104 4e-18 seq3 98.7 2e-16 >seq61 Length=1579179 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | ||||| |||||||| || || |||||||| ||||| Sbjct 1176507 GCCAAGCGTCACCGCAAGATTT-TGCGAGACAACATCCAGGGTATTACCAAGCCCGCTAT 1176565 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| | |||| Sbjct 1176566 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 1176606 >seq3 Length=1462274 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||||| | ||||| |||||||| || ||||||||||| ||||| Sbjct 1428115 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 1428173 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||| || ||||| ||||||||| | |||| Sbjct 1428174 CCGACGTCTCGCTCGCCGAGGTGGTGTCAAGCGTATTTCTG 1428214 Score = 86.0 bits (94), Expect = 1e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | ||| ||||||| ||||||| || || || | ||||| Sbjct 1428270 TGATCTACGAGGAGACCCGCGGTGTCTTGAAGACCTTCCTCGAGGGTGTCATTCGTGATG 1428329 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| || || || | || | ||||||| Sbjct 1428330 CCGTCACCTACACCGAGCACGCCAAGCGAAAGACAGTGACATCTCTTGACGTTGTCTATG 1428389 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | | || || |||||||| | |||| ||||| || Sbjct 1428390 CCCTCAAGCGACAAGGCCGCACTCTTTACGGTTTCGG 1428426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075142398659