Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq44 347 3e-90 >seq44 Length=2799272 Score = 347 bits (384), Expect = 3e-90 Identities = 1140/1744 (65%), Gaps = 52/1744 (3%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||||| || || || ||||| ||| | |||||||| ||||||| ||| | ||| Sbjct 2096010 ATTGTCGAGCGTCCTCAGCACATGATCATGCGTGTGTCTATTGGCATCTGGGGTGATGAT 2095951 Query 363502 GTTGA---TGCCGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCAC 363555 |||| || || | || |||||||| ||| | || || || | ||||| || Sbjct 2095950 ATTGAGCGTGTCGTG---GAGACATATAACCTTAT--GTCCAGCAAGT-TCTTCACCCAT 2095897 Query 363556 GCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT 363615 || | || || | | ||||||||| || | | | || ||| | || || ||||| | Sbjct 2095896 GCTTCCCCCACCCTCTTCAATGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTG 2095837 Query 363616 CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTT 363675 | | |||||||| || ||| || ||||||| ||| || || |||| ||||| | Sbjct 2095836 GTTGACATGAAGGAGGACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATG 2095777 Query 363676 ATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAAC 363732 |||||||||| || || || |||||| | | || | || | | ||||| || | | Sbjct 2095776 ATTTCCAAGATGGCTGGTGGTATTGGTCT--CAATGCCCACCGAATCCGTGCCACTGG-C 2095720 Query 363733 AGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTT 363791 |||||| || || || ||| || || || | ||||| ||||| ||||| || Sbjct 2095719 TCCTACATTGCTGGTACCAACGG-TACATCCAACGGTGTTGTTCCTATGCTACGTGTCTT 2095661 Query 363792 TGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTAT 363851 |||| ||||| | ||||| || |||||||| ||||| || || ||||| || Sbjct 2095660 CAACAACACTGCCCGCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCCAT 2095601 Query 363852 GTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGG 363911 || || |||||| || || ||| | || ||||| ||||| ||||| || ||| || Sbjct 2095600 CTACCTAGAGCCTTGGCACGCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGG 2095541 Query 363912 AAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTAT 363971 || ||||| | || || || || |||||| || || ||| | |||| | ||| || Sbjct 2095540 TAAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGATCTTTTCAT 2095481 Query 363972 GAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTC 364030 |||||| || ||| || || | ||| | || | ||||| |||| || || |||| Sbjct 2095480 GAAGCGTGTTGAGA-AGAACGGAGAGTGGACCCTTATGTGCCCCAACGAGTGCCCTGGTC 2095422 Query 364031 TTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAA 364090 || |||| | ||||| || | || || || ||||| ||||| || ||| || | Sbjct 2095421 TTGCCGACTGCTACGGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTA 2095362 Query 364091 AGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTG 364150 ||| ||| ||| | || || |||||||| |||| ||||||| | || | |||| | Sbjct 2095361 AGGGTCGCAAGTCCATCAAGGCTCAGAAGCTTTGGTATGCCATCCTTGAGGCCCAGACCG 2095302 Query 364151 AGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGC 364210 |||| |||| |||| ||| | ||||| ||| | || ||||||||| ||||||| || Sbjct 2095301 AGACCGGAAACCCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGA 2095242 Query 364211 ACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCC 364269 |||| ||||| || | | || | || || || || ||||| || || ||| || || Sbjct 2095241 ACCTCGGTACCATCC-GAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCT 2095183 Query 364270 GACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA---GAT 364326 || ||| || || || |||||||| || | || || || || || | || ||| Sbjct 2095182 GATGAGGTCGCTGTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCATCAACTACGAT 2095123 Query 364327 GGTACTTT---TGACCACCAGCATCTTTATGACGTAACCTATCATGCTA-CTT--GCAAT 364380 | ||| |||| | || | || || | || | ||| | | | | |||| Sbjct 2095122 GAGGCTTGCTATGACTTCAAGAAGCTGCATCAGGTCAG---TCAGGTTGTCGTCCGCAAC 2095066 Query 364381 CTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTA 364435 | ||||| | ||||| ||| | || || | | || || || ||| | Sbjct 2095065 TTGAACAAGATCATCGATGTCAATCACTACCCTGTACAAGAGGCTCGCAACAGC-----A 2095011 Query 364436 ATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC 364495 | |||||||| || || || ||||||||||| ||||| || ||||| | ||| | ||| Sbjct 2095010 ACATGCGTCACCGACCTATCGGTCTTGGTGTCCAGGGTCTTGCTGATGCTTTCCT--TGC 2094953 Query 364496 TCAAG--ATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAAC 364553 || ||| | ||||| || || || ||| | | || || ||| |||||||||| || Sbjct 2094952 TCTGCGCATGCCCTTTGAGTCTCCCGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGAC 2094893 Query 364554 AATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACT 364612 || || || || | ||||| || ||| | ||||| || |||| |||| Sbjct 2094892 CATCTACCACGCTGCCCTCACTGCCTCC-GTGCAGTTGGCCAAGGAGGAGGGTCCCTACT 2094834 Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCA 364672 |||| | |||| || || || |||| | ||||||| || | ||||| |||| Sbjct 2094833 CTACCTTCAAGGGTTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCA 2094774 Query 364673 CGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTC 364732 ||| || | || ||| ||||||| | || || | ||||||| || |||| | Sbjct 2094773 AGCCTTCCGACCTTTGGGACTGGGAGAGTCTTCGAGAGGATGTTAAGACTCACGGTATCC 2094714 Query 364733 GCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACA 364792 | ||| || | || || ||||| || || |||| | ||||| || || |||| Sbjct 2094713 GTAACAGTCTGCTCCTCGCCCCTATGCCTACTGCCAGTACTTCGCAGATTCTGGGTAACA 2094654 Query 364793 ACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAAT 364852 ||||||||||||| || | || ||| |||| ||||| || ||| | || || | Sbjct 2094653 ACGAGTGCTTCGAGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGT 2094594 Query 364853 TTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACA 364912 | | ||| || || | | |||| |||||| |||| || ||||| ||| Sbjct 2094593 TCCAGGTTGTCAACCCCTGGTTGCTCAAAGATCTTGTCGACATGGGCTTGTGGTCTGATG 2094534 Query 364913 GCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAG 364972 |||||||||| ||| || ||| ||| |||||| | |||||||| || | || | Sbjct 2094533 CCATGAAGAACCGTATTATTTCCGATAACGGTTCTATTCAGAACATCCCCAATATCCCTG 2094474 Query 364973 AAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATA 365032 || | ||| || ||||||| || || ||||| ||||| ||| | | | | Sbjct 2094473 CCGACGTCAAGGCTCTTTACAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTTGTCCAGA 2094414 Query 365033 TGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC 365092 |||| ||||| || ||||| || ||| |||| ||| || | ||| | ||||| Sbjct 2094413 TGGCTGCCGACCGAGGTGCATTCATCGATCAGTCCCAATCCCTCAACATTCACATGAAGG 2094354 Query 365093 AGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGA 365152 | || || | |||| | || |||||| ||| || ||||| ||||| |||| Sbjct 2094353 ATCCCACGATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTTGGTCTCAAGA 2094294 Query 365153 CAGG 365156 | || Sbjct 2094293 CTGG 2094290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352547949266