Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq44 194 2e-44 seq61 140 4e-28 >seq44 Length=2799272 Score = 194 bits (214), Expect = 2e-44 Identities = 745/1155 (65%), Gaps = 30/1155 (3%) Strand=Plus/Plus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| || || || || ||||| || ||||||| || | || | || |||||| Sbjct 2095148 GCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCA 2095207 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 ||||| |||||| | |||||| || | || | || || ||||| |||||| Sbjct 2095208 GTGCACAGATTAGAGCTTCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAG 2095267 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 |||||||| ||||| ||||| || | || || || |||| | || | || || | | Sbjct 2095268 GCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCAAGGATGGCATAC 2095327 Query 62927 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTA--TAGT 62980 || | | || ||||||| || || ||| | ||| ||| || ||||| | Sbjct 2095328 CAAA-GCTTCTGAGCCTTGATG---GACTTGCGACCCTTACCTTCCCTCTCGTACTTCTC 2095383 Query 62981 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGA 63040 ||| | | || ||||| || || | | | | || ||||| || || | || Sbjct 2095384 GTAGAGGGCC--TCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGG 2095441 Query 63041 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63100 ||||| | | ||||||||||| | || || || ||||| || |||||||| ||||| Sbjct 2095442 CACATAAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAG 2095501 Query 63101 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63160 || || | || || || | || | ||||| || || |||||| ||||| Sbjct 2095502 AGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCA 2095561 Query 63161 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63220 |||||| | | | ||||| ||||| || || | ||| ||||| | | | ||||| || Sbjct 2095562 AGGAACTCGAAGACATCAGCGTGCCAAGGCTCTAGGTAGATGGCAAAAGCACCAGGTCGC 2095621 Query 63221 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63280 ||||| || |||||||| | ||| | || ||||| || | || | | ||| |||| | Sbjct 2095622 TTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACA 2095681 Query 63281 ATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTAC 63338 | ||| ||||||||||| ||||| || | || ||| ||| ||||||| || | Sbjct 2095682 ACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGG 2095741 Query 63339 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 63398 |||| ||||| || || || ||||| || || || | || || || | |||| Sbjct 2095742 GCATTG--AGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTAT 2095799 Query 63399 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63458 ||||||| || || || || || ||| |||||| || | || || || | ||| Sbjct 2095800 CATAGATACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAGGAAAGCTGGG 2095859 Query 63459 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAA 63518 | || || || ||||| || | ||| || ||||| || || || | || || | Sbjct 2095860 GTTGAGGGGTACCAGCATTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACA 2095919 Query 63519 GTAGATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCG 63574 || || || ||||| | | || ||||| || |||| || | | Sbjct 2095920 TAAGGTTATATGTCTCCACGACACGCTCAATATCATCACCCCAGATG----CCAATAGAC 2095975 Query 63575 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63634 |||||||| | |||||||||||| | || || |||||| || || || | | ||| Sbjct 2095976 ACACGCATGATCATGTGCTGAGGACGCTCGACAATCTTGCCGTCAATCTTGAGGAGGTAT 2096035 Query 63635 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 63694 ||| ||||| || || || ||||| || | |||| || || || ||||| | ||| Sbjct 2096036 GATCGCTCCAATGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTCGTAGACAATG 2096095 Query 63695 ACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAAT 63753 | |||| || | ||||| | | |||| || ||| | | ||| || || || Sbjct 2096096 GCAGAGTCTAGCTCTTCCTTGTGTCGCATAAC-GCACTCATAGGTCTCCTTGGAGATCAT 2096154 Query 63754 AGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATC-CTC-CATCACTTCA 63811 ||| | | || || | | ||||| |||||| ||| ||| ||| || | | | Sbjct 2096155 AGGTGACGGCCGGCCGTTCCTGGCGTTGACGTAGTTGTATAGATCGCTCACAACGGTAGA 2096214 Query 63812 CTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATG 63871 | || | || || || | ||||| || || || ||||| || | ||| || || ||| Sbjct 2096215 C--CATTGCTTCTTGGTCTGCTTGTGAAGGTTGGAGACGGCAATACGAGCCGCAAGGATG 2096272 Query 63872 GCATAATCCGGATGT 63886 || || || |||||| Sbjct 2096273 GCGTAGTCGGGATGT 2096287 >seq61 Length=1579179 Score = 140 bits (154), Expect = 4e-28 Identities = 368/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| ||| ||| |||||||| || | | || | |||||||| || || || Sbjct 1456579 CAGGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1456638 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| ||||||||||| || ||||| || ||||| ||||| | ||| ||||| Sbjct 1456639 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1456698 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 32837 || || || || || || ||||||| || | || || | | | | |||| || Sbjct 1456699 ATACCCTCGACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGTAGAGTCCTTGTCCTGG 1456758 Query 32838 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| | || ||||| || ||||||||| | || || || || || | ||| || Sbjct 1456759 ATCCATCGAATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGTT 1456817 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 ||||| ||| || | ||||| | || || ||||| | || ||| | Sbjct 1456818 GAAGAGGTAGGTTCGCTGGGCGGGCTCTTTGATGTAGGTGTCAATGAGCAGGGAATAGGT 1456877 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 ||||| |||||||| || || ||||| |||||||||||||||| |||||| | || Sbjct 1456878 CTCCGAGTGAATGTTCTCCATCATGATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGAT 1456937 Query 33017 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 33076 ||| || || | ||||| || | | ||| || || || || || || || || Sbjct 1456938 CTGGACCTCGCCGCTGAATCGCTCAACGAGATTCTCGTTGACAATGCCATCGGACGCAGC 1456997 Query 33077 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCA 33133 || || || | | || || || | | || || | || | | || ||||| Sbjct 1456998 GAAGAAGGCAAGGATGTGAGAGATGAAGAACTGCTCATCAGTGGTCAGACGGTTGTTCCA 1457057 Query 33134 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193 || | || || || || | ||| | || || | ||||| || || ||||| ||||| Sbjct 1457058 GTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCGGCCTT 1457117 Query 33194 TTTATACATATTCCAGAT 33211 || ||||| | |||||| Sbjct 1457118 CTTGTACATTTGCCAGAT 1457135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631501014800